The 2.0 version of rSNPBase

Variant report

Variant rs34024604
Chromosome Location chr6:75888549-75888550
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:75862400-75888600 Weak transcription Fetal Intestine Large intestine
2 chr6:75862400-75889800 Weak transcription Muscle Satellite Cultured Cells --
3 chr6:75877200-75900200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr6:75877400-75888800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr6:75877600-75905800 Strong transcription HSMM muscle
6 chr6:75881400-75889200 Weak transcription Aorta Aorta
7 chr6:75881400-75896400 Weak transcription Fetal Kidney kidney
8 chr6:75881600-75891600 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr6:75881600-75893200 Weak transcription Fetal Intestine Small intestine
10 chr6:75881600-75898000 Weak transcription Colon Smooth Muscle Colon
11 chr6:75881800-75889600 Weak transcription Rectal Smooth Muscle rectum
12 chr6:75882600-75889800 Strong transcription Osteobl bone
13 chr6:75882600-75891600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr6:75883600-75888600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr6:75884200-75889600 Strong transcription Stomach Smooth Muscle stomach
16 chr6:75884200-75891000 Strong transcription HSMMtube muscle
17 chr6:75884400-75890800 Strong transcription NH-A brain
18 chr6:75884400-75894200 Strong transcription Fetal Muscle Trunk muscle
19 chr6:75885600-75890200 Strong transcription Breast Myoepithelial Primary Cells Breast
20 chr6:75886200-75889600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr6:75886200-75889600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr6:75886200-75889600 Weak transcription Placenta Amnion Placenta Amnion
23 chr6:75886200-75889800 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr6:75886200-75890600 Weak transcription Lung lung
25 chr6:75886200-75892800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr6:75886400-75889400 Weak transcription Adipose Nuclei Adipose
27 chr6:75886400-75889600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr6:75886400-75889800 Weak transcription Ovary ovary
29 chr6:75886600-75896400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr6:75887400-75893600 Weak transcription Psoas Muscle Psoas
31 chr6:75887600-75891200 Weak transcription Fetal Muscle Leg muscle
32 chr6:75887600-75911000 Weak transcription Fetal Stomach stomach
33 chr6:75887800-75888600 Strong transcription HMEC breast
34 chr6:75888000-75890400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr6:75888200-75888600 Enhancers HUES48 Cell Line embryonic stem cell
36 chr6:75888200-75888800 Enhancers HUVEC blood vessel
37 chr6:75888200-75890200 Genic enhancers NHEK skin
38 chr6:75888200-75890800 Enhancers Fetal Heart heart
39 chr6:75888200-75890800 Genic enhancers NHDF-Ad bronchial
40 chr6:75888200-75893600 Strong transcription NHLF lung
41 chr6:75888400-75888800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
42 chr6:75888400-75890000 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr6:75888400-75890200 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr6:75888400-75893000 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015