The 2.0 version of rSNPBase

Variant report

Variant rs34025653
Chromosome Location chr4:88278484-88278485
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:88254800-88311800 Weak transcription Placenta Amnion Placenta Amnion
2 chr4:88255000-88292400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr4:88255200-88285600 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr4:88255200-88293800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr4:88256200-88292800 Weak transcription Gastric stomach
6 chr4:88256200-88310600 Weak transcription Right Ventricle heart
7 chr4:88257000-88291000 Weak transcription HUVEC blood vessel
8 chr4:88257800-88311800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr4:88258000-88285400 Weak transcription Small Intestine intestine
10 chr4:88259200-88283000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr4:88261000-88280000 Weak transcription Left Ventricle heart
12 chr4:88261000-88283200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr4:88261200-88285000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr4:88262200-88280200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr4:88263000-88280000 Weak transcription Pancreas Pancrea
16 chr4:88263200-88281600 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr4:88264200-88285600 Weak transcription Spleen Spleen
18 chr4:88264400-88279800 Weak transcription Hela-S3 cervix
19 chr4:88266200-88285000 Weak transcription Brain Cingulate Gyrus brain
20 chr4:88266400-88292200 Weak transcription Fetal Brain Male brain
21 chr4:88266600-88288200 Weak transcription Brain Germinal Matrix brain
22 chr4:88267200-88281400 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr4:88267400-88290600 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr4:88267400-88308000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
25 chr4:88267600-88292400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr4:88267800-88306000 Weak transcription Fetal Brain Female brain
27 chr4:88268000-88280000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr4:88268000-88292200 Weak transcription Ovary ovary
29 chr4:88271200-88298000 Weak transcription HSMMtube muscle
30 chr4:88273000-88292200 Weak transcription Brain Substantia Nigra brain
31 chr4:88273400-88298800 Weak transcription Fetal Heart heart
32 chr4:88273800-88284000 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr4:88274200-88279000 Strong transcription Duodenum Mucosa Duodenum
34 chr4:88274200-88281000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
35 chr4:88274200-88288200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr4:88274200-88296200 Strong transcription Primary monocytes fromperipheralblood blood
37 chr4:88274400-88278800 Strong transcription Placenta Placenta
38 chr4:88274400-88286800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr4:88274400-88286800 Strong transcription HepG2 liver
40 chr4:88274400-88296400 Strong transcription Rectal Mucosa Donor 29 rectum
41 chr4:88274400-88297000 Strong transcription Rectal Mucosa Donor 31 rectum
42 chr4:88274400-88303400 Strong transcription Primary neutrophils fromperipheralblood blood
43 chr4:88274600-88278800 Strong transcription Breast Myoepithelial Primary Cells Breast
44 chr4:88274600-88278800 Strong transcription Primary T helper naive cells fromperipheralblood blood
45 chr4:88274600-88287200 Strong transcription Sigmoid Colon Sigmoid Colon
46 chr4:88274600-88288000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr4:88274600-88296200 Strong transcription Primary T cells fromperipheralblood blood
48 chr4:88274600-88296400 Strong transcription Primary T regulatory cells fromperipheralblood blood
49 chr4:88274600-88296600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
50 chr4:88274600-88297200 Strong transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015