Variant report

Variant	rs34027912
Chromosome Location	chr8:21024042-21024043
allele	-/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1032450	chr8:20514995-21033577	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	nsv539524	chr8:20514995-21033577	Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
3	nsv1034265	chr8:20742935-21152545	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
4	nsv539528	chr8:20742935-21152545	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
5	nsv831260	chr8:20907266-21097125	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
6	nsv469878	chr8:20955260-21128307	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
7	nsv482339	chr8:20955260-21128307	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
8	nsv831261	chr8:20996095-21193619	Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
9	nsv890649	chr8:21001379-21171259	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
10	nsv1023459	chr8:21023591-21042178	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:21020000-21027200	Enhancers	Fetal Intestine Small	intestine
2	chr8:21020200-21026000	Weak transcription	Spleen	Spleen
3	chr8:21020800-21024600	Enhancers	Rectal Mucosa Donor 31	rectum
4	chr8:21020800-21024800	Enhancers	Sigmoid Colon	Sigmoid Colon
5	chr8:21020800-21025000	Enhancers	Rectal Mucosa Donor 29	rectum
6	chr8:21023000-21026400	Enhancers	Duodenum Mucosa	Duodenum
7	chr8:21023400-21024200	Enhancers	Psoas Muscle	Psoas
8	chr8:21023600-21024200	Enhancers	Skeletal Muscle Female	skeletal muscle
9	chr8:21023600-21024600	Weak transcription	Colonic Mucosa	Colon
10	chr8:21023600-21026400	Weak transcription	Fetal Brain Male	brain
11	chr8:21023600-21026400	Weak transcription	Fetal Brain Female	brain
12	chr8:21023600-21027000	Weak transcription	Fetal Thymus	thymus
13	chr8:21024000-21025000	Weak transcription	Fetal Intestine Large	intestine
14	chr8:21024000-21026800	Weak transcription	Primary hematopoietic stem cells	blood
15	chr8:21024000-21026800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr8:21024000-21026800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr8:21024000-21027200	Weak transcription	Primary hematopoietic stem cells short term culture	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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