Variant report

Variant	rs34064091
Chromosome Location	chr1:210654686-210654687
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs12755271	0.97[EUR][1000 genomes]
rs72747449	0.91[EUR][1000 genomes]
rs926574	0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv4376	chr1:210627620-210672326	Enhancers Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:210639400-210668200	Weak transcription	Primary T cells from cord blood	blood
2	chr1:210640000-210660400	Weak transcription	Aorta	Aorta
3	chr1:210643200-210674000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr1:210648000-210656400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
5	chr1:210648400-210658800	Enhancers	Breast Myoepithelial Primary Cells	Breast
6	chr1:210648800-210660400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr1:210650800-210655000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr1:210653800-210678800	Weak transcription	HSMM	muscle
9	chr1:210654200-210655600	Weak transcription	Fetal Heart	heart
10	chr1:210654400-210659000	Weak transcription	HSMMtube	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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