The 2.0 version of rSNPBase

Variant report

Variant rs34067354
Chromosome Location chr2:112694772-112694773
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:112664600-112702200 Weak transcription Rectal Smooth Muscle rectum
2 chr2:112676400-112702200 Weak transcription Colon Smooth Muscle Colon
3 chr2:112677800-112697800 Weak transcription HUES6 Cell Line embryonic stem cell
4 chr2:112678000-112705600 Weak transcription Esophagus oesophagus
5 chr2:112682400-112703200 Weak transcription Placenta Placenta
6 chr2:112683200-112703200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr2:112683400-112698600 Weak transcription H9 Cell Line embryonic stem cell
8 chr2:112684600-112703000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr2:112684800-112705200 Weak transcription Fetal Muscle Leg muscle
10 chr2:112685000-112702200 Weak transcription Pancreas Pancrea
11 chr2:112685600-112703200 Weak transcription Right Ventricle heart
12 chr2:112687000-112695400 Weak transcription Gastric stomach
13 chr2:112687000-112698000 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr2:112687000-112703600 Weak transcription Fetal Kidney kidney
15 chr2:112688400-112703000 Weak transcription Placenta Amnion Placenta Amnion
16 chr2:112688400-112703200 Weak transcription Fetal Intestine Large intestine
17 chr2:112688600-112696000 Weak transcription Brain Hippocampus Middle brain
18 chr2:112688600-112700200 Weak transcription Lung lung
19 chr2:112688600-112702600 Weak transcription Monocytes-CD14+_RO01746 blood
20 chr2:112688600-112703000 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr2:112688800-112696000 Weak transcription Brain Substantia Nigra brain
22 chr2:112688800-112697800 Weak transcription Adipose Nuclei Adipose
23 chr2:112688800-112698200 Weak transcription Brain Anterior Caudate brain
24 chr2:112688800-112702200 Weak transcription Primary hematopoietic stem cells blood
25 chr2:112688800-112703600 Weak transcription Aorta Aorta
26 chr2:112689000-112702400 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr2:112689000-112703000 Weak transcription Left Ventricle heart
28 chr2:112689000-112703200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr2:112689000-112703200 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr2:112689200-112734400 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr2:112689400-112702200 Weak transcription Fetal Intestine Small intestine
32 chr2:112689600-112703000 Weak transcription Fetal Stomach stomach
33 chr2:112690400-112694800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr2:112690600-112702200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr2:112690800-112696600 Weak transcription Small Intestine intestine
36 chr2:112691000-112696400 Weak transcription Duodenum Mucosa Duodenum
37 chr2:112691400-112697600 Weak transcription Liver Liver
38 chr2:112691400-112705200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr2:112693000-112699400 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr2:112693000-112703200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr2:112693200-112712600 Weak transcription Spleen Spleen
42 chr2:112694200-112694800 Genic enhancers Cortex derived primary cultured neurospheres brain
43 chr2:112694200-112695200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr2:112694200-112695400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr2:112694200-112696000 Enhancers Ovary ovary
46 chr2:112694200-112697000 Strong transcription HepG2 liver
47 chr2:112694200-112700400 Enhancers HUVEC blood vessel
48 chr2:112694400-112694800 Enhancers Stomach Smooth Muscle stomach
49 chr2:112694400-112695000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
50 chr2:112694400-112695000 Enhancers Fetal Lung lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015