Variant report

Variant	rs34071195
Chromosome Location	chr2:73786188-73786189
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:73780509..73782432-chr2:73785003..73786606,2	K562	blood:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs17009373	1.00[AMR][1000 genomes]
rs17040334	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428051	chr2:73717032-74030067	ZNF genes & repeats Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
2	esv2757806	chr2:73717032-74078592	Active TSS Weak transcription ZNF genes & repeats Enhancers Genic enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
3	esv2759060	chr2:73717032-74078592	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
4	nsv874267	chr2:73717656-73857002	Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:96 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:73731800-73807600	Weak transcription	Hela-S3	cervix
2	chr2:73744200-73799800	Weak transcription	NH-A	brain
3	chr2:73747800-73786800	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr2:73758000-73799800	Weak transcription	Brain Cingulate Gyrus	brain
5	chr2:73758200-73800200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
6	chr2:73758400-73786800	Weak transcription	Brain Angular Gyrus	brain
7	chr2:73759600-73828000	Weak transcription	Pancreas	Pancrea
8	chr2:73760600-73828000	Weak transcription	Right Ventricle	heart
9	chr2:73760800-73787000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr2:73762000-73786600	Weak transcription	Muscle Satellite Cultured Cells	--
11	chr2:73764600-73806800	Weak transcription	Primary T helper cells fromperipheralblood	blood
12	chr2:73764600-73807200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
13	chr2:73765200-73786600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
14	chr2:73765200-73807800	Weak transcription	Brain Anterior Caudate	brain
15	chr2:73765400-73786200	Weak transcription	Primary T helper cells PMA-I stimulated	--
16	chr2:73765400-73786200	Weak transcription	Rectal Mucosa Donor 29	rectum
17	chr2:73765400-73786200	Weak transcription	HSMM	muscle
18	chr2:73765400-73792000	Weak transcription	HSMMtube	muscle
19	chr2:73765400-73808400	Weak transcription	HepG2	liver
20	chr2:73765600-73786200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
21	chr2:73765600-73786200	Weak transcription	Fetal Lung	lung
22	chr2:73765600-73787200	Weak transcription	A549	lung
23	chr2:73765600-73799600	Weak transcription	Brain Hippocampus Middle	brain
24	chr2:73765800-73815400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
25	chr2:73765800-73837800	Weak transcription	Fetal Brain Male	brain
26	chr2:73766000-73793400	Weak transcription	Aorta	Aorta
27	chr2:73766000-73807400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
28	chr2:73766400-73786800	Weak transcription	Brain Germinal Matrix	brain
29	chr2:73766400-73799400	Weak transcription	Thymus	Thymus
30	chr2:73766400-73799600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr2:73766400-73799600	Weak transcription	Cortex derived primary cultured neurospheres	brain
32	chr2:73766400-73799600	Weak transcription	Fetal Muscle Trunk	muscle
33	chr2:73766400-73799600	Weak transcription	Lung	lung
34	chr2:73766400-73803200	Weak transcription	Fetal Intestine Large	intestine
35	chr2:73767200-73791800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
36	chr2:73769200-73802800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
37	chr2:73772000-73799600	Weak transcription	Sigmoid Colon	Sigmoid Colon
38	chr2:73772200-73799400	Weak transcription	Fetal Brain Female	brain
39	chr2:73773200-73788400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
40	chr2:73773200-73795200	Weak transcription	Small Intestine	intestine
41	chr2:73775600-73811400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
42	chr2:73775800-73789400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
43	chr2:73776000-73799600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
44	chr2:73776000-73801200	Weak transcription	GM12878-XiMat	blood
45	chr2:73776000-73821600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
46	chr2:73776200-73787400	Weak transcription	Primary T cells fromperipheralblood	blood
47	chr2:73776400-73807800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
48	chr2:73778000-73786400	Weak transcription	Liver	Liver
49	chr2:73778200-73786200	Weak transcription	Placenta	Placenta
50	chr2:73778600-73799800	Weak transcription	Fetal Stomach	stomach

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