Variant report

Variant	rs34128040
Chromosome Location	chr8:126097295-126097296
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:126094932..126099483-chr8:126100368..126105771,7	K562	blood:
2	chr8:126092989..126095480-chr8:126096326..126098536,2	K562	blood:
3	chr8:126093925..126097720-chr8:126099052..126104024,5	MCF-7	breast:

Variant related genes	Relation type
ENSG00000164961	Chromatin interaction
ENSG00000156831	Chromatin interaction

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs13263406	1.00[ASN][1000 genomes]
rs13266494	1.00[ASN][1000 genomes]
rs36114239	1.00[ASN][1000 genomes]
rs71531253	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891434	chr8:125630655-126324432	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
2	nsv1030748	chr8:126012282-126137840	ZNF genes & repeats Enhancers Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
3	nsv539743	chr8:126012282-126137840	Active TSS Strong transcription Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
4	nsv949614	chr8:126063646-126376699	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
5	nsv465803	chr8:126068197-126132816	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	16 gene(s)	inside rSNPs	diseases
6	nsv612148	chr8:126068197-126132816	Enhancers Active TSS Genic enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:126015400-126098000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
2	chr8:126023600-126099000	Strong transcription	Monocytes-CD14+_RO01746	blood
3	chr8:126028600-126097400	Strong transcription	Primary neutrophils fromperipheralblood	blood
4	chr8:126029800-126097400	Strong transcription	Primary monocytes fromperipheralblood	blood
5	chr8:126029800-126103000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr8:126042600-126098600	Strong transcription	Primary T helper cells fromperipheralblood	blood
7	chr8:126042600-126098800	Strong transcription	Primary T cells fromperipheralblood	blood
8	chr8:126043000-126098000	Strong transcription	Fetal Thymus	thymus
9	chr8:126046600-126099600	Strong transcription	Primary B cells from peripheral blood	blood
10	chr8:126052800-126103200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
11	chr8:126064200-126102800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
12	chr8:126066600-126099400	Strong transcription	Primary B cells from cord blood	blood
13	chr8:126071800-126103000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr8:126073200-126098200	Strong transcription	Primary hematopoietic stem cells	blood
15	chr8:126073200-126098400	Strong transcription	Primary T cells from cord blood	blood
16	chr8:126083800-126097800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr8:126083800-126098000	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr8:126084000-126102400	Weak transcription	Fetal Heart	heart
19	chr8:126084400-126097400	Strong transcription	Placenta	Placenta
20	chr8:126085000-126098400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr8:126085400-126102400	Weak transcription	Pancreatic Islets	Pancreatic Islet
22	chr8:126085400-126102600	Weak transcription	Stomach Mucosa	stomach
23	chr8:126088200-126098000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr8:126088400-126098800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
25	chr8:126090800-126098000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
26	chr8:126090800-126098200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
27	chr8:126090800-126100200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr8:126090800-126102800	Weak transcription	Aorta	Aorta
29	chr8:126091000-126103000	Weak transcription	Placenta Amnion	Placenta Amnion
30	chr8:126091200-126097800	Weak transcription	Spleen	Spleen
31	chr8:126091200-126102600	Weak transcription	Fetal Brain Male	brain
32	chr8:126091200-126102600	Weak transcription	NHLF	lung
33	chr8:126091200-126103000	Weak transcription	Esophagus	oesophagus
34	chr8:126091200-126103000	Weak transcription	Pancreas	Pancrea
35	chr8:126091200-126103200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
36	chr8:126091800-126101800	Weak transcription	Fetal Intestine Small	intestine
37	chr8:126091800-126103200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
38	chr8:126092200-126097400	Strong transcription	NHDF-Ad	bronchial
39	chr8:126093000-126102800	Weak transcription	Small Intestine	intestine
40	chr8:126093000-126103000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
41	chr8:126093200-126101800	Weak transcription	K562	blood
42	chr8:126094000-126097800	Weak transcription	Fetal Stomach	stomach
43	chr8:126094000-126098000	Weak transcription	Gastric	stomach
44	chr8:126094000-126098000	Weak transcription	Sigmoid Colon	Sigmoid Colon
45	chr8:126094000-126099000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
46	chr8:126094000-126100800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
47	chr8:126094000-126101800	Weak transcription	Thymus	Thymus
48	chr8:126094000-126102200	Weak transcription	Fetal Brain Female	brain
49	chr8:126094000-126103000	Weak transcription	Lung	lung
50	chr8:126094000-126103000	Weak transcription	Right Ventricle	heart

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