Variant report

Variant	rs34138827
Chromosome Location	chr9:101767245-101767246
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:101766336..101770748-chr9:101884242..101889062,4	K562	blood:
2	chr9:101764776..101767586-chr9:101769172..101770908,2	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs11792605	1.00[AFR][1000 genomes]
rs11793365	1.00[AFR][1000 genomes]
rs11794814	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv6635	chr9:101728257-101773253	Enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:101760200-101772800	Weak transcription	Aorta	Aorta
2	chr9:101760400-101767400	Weak transcription	Rectal Mucosa Donor 29	rectum
3	chr9:101761600-101767400	Weak transcription	Colonic Mucosa	Colon
4	chr9:101761600-101768400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr9:101761600-101770400	Weak transcription	Fetal Intestine Small	intestine
6	chr9:101761600-101814400	Weak transcription	Gastric	stomach
7	chr9:101761800-101768200	Weak transcription	Spleen	Spleen
8	chr9:101761800-101777800	Weak transcription	Pancreas	Pancrea
9	chr9:101761800-101785200	Weak transcription	Skeletal Muscle Female	skeletal muscle
10	chr9:101762600-101769400	Strong transcription	Fetal Muscle Trunk	muscle
11	chr9:101762800-101769000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
12	chr9:101762800-101769600	Strong transcription	Stomach Smooth Muscle	stomach
13	chr9:101763600-101767600	Strong transcription	Duodenum Smooth Muscle	Duodenum
14	chr9:101763600-101778000	Weak transcription	HSMMtube	muscle
15	chr9:101764000-101768200	Weak transcription	Placenta Amnion	Placenta Amnion
16	chr9:101764000-101770800	Strong transcription	Fetal Muscle Leg	muscle
17	chr9:101764200-101769400	Strong transcription	Colon Smooth Muscle	Colon
18	chr9:101764200-101772600	Strong transcription	Adipose Nuclei	Adipose
19	chr9:101764200-101775400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
20	chr9:101764400-101768200	Weak transcription	Hela-S3	cervix
21	chr9:101764600-101768200	Weak transcription	K562	blood
22	chr9:101764800-101768600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr9:101765200-101767400	Strong transcription	Fetal Stomach	stomach
24	chr9:101765400-101767600	Strong transcription	Rectal Smooth Muscle	rectum
25	chr9:101765400-101769200	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr9:101765600-101769400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
27	chr9:101765800-101767600	Strong transcription	Ovary	ovary
28	chr9:101765800-101768800	Strong transcription	Skeletal Muscle Male	skeletal muscle
29	chr9:101766200-101767600	Strong transcription	Placenta	Placenta
30	chr9:101766400-101767400	Enhancers	Fetal Thymus	thymus
31	chr9:101766800-101767600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr9:101766800-101768800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
33	chr9:101767200-101768000	Strong transcription	Right Ventricle	heart
34	chr9:101767200-101768600	Weak transcription	Left Ventricle	heart

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