Variant report

Variant	rs34203191
Chromosome Location	chr10:99531483-99531484
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1817777	chr10:99196035-99558169	Weak transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
2	nsv467441	chr10:99472710-99541104	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
3	nsv552026	chr10:99472710-99541104	Weak transcription Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
4	esv3340017	chr10:99530387-99533135	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
5	esv3390726	chr10:99530862-99532860	Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:78 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:99530200-99532200	Bivalent/Poised TSS	Duodenum Mucosa	Duodenum
2	chr10:99530400-99532200	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
3	chr10:99530600-99531600	Bivalent/Poised TSS	Brain Inferior Temporal Lobe	brain
4	chr10:99530600-99531600	Bivalent/Poised TSS	HSMM	muscle
5	chr10:99530600-99532000	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
6	chr10:99530600-99532000	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
7	chr10:99530600-99532200	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
8	chr10:99530600-99532200	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
9	chr10:99530800-99531600	Bivalent/Poised TSS	Fetal Intestine Large	intestine
10	chr10:99530800-99531600	Bivalent/Poised TSS	HSMMtube	muscle
11	chr10:99530800-99532000	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
12	chr10:99530800-99532000	Active TSS	Brain Angular Gyrus	brain
13	chr10:99530800-99532000	Bivalent/Poised TSS	Fetal Intestine Small	intestine
14	chr10:99530800-99532000	Active TSS	Pancreatic Islets	Pancreatic Islet
15	chr10:99530800-99532000	Bivalent/Poised TSS	Psoas Muscle	Psoas
16	chr10:99530800-99532000	Bivalent Enhancer	Spleen	Spleen
17	chr10:99530800-99532200	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
18	chr10:99530800-99532200	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
19	chr10:99530800-99532200	Bivalent/Poised TSS	iPS DF 6.9 Cell Line	embryonic stem cell
20	chr10:99530800-99532200	Bivalent/Poised TSS	Fetal Brain Female	brain
21	chr10:99530800-99532400	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
22	chr10:99530800-99532400	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
23	chr10:99531000-99531600	Flanking Bivalent TSS/Enh	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
24	chr10:99531000-99531600	Flanking Bivalent TSS/Enh	H9 Derived Neuron Cultured Cells	ES cell derived
25	chr10:99531000-99531600	Flanking Bivalent TSS/Enh	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
26	chr10:99531000-99531600	Flanking Bivalent TSS/Enh	Breast Myoepithelial Primary Cells	Breast
27	chr10:99531000-99531600	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
28	chr10:99531000-99531600	Flanking Bivalent TSS/Enh	Adipose Nuclei	Adipose
29	chr10:99531000-99531600	Bivalent/Poised TSS	NHEK	skin
30	chr10:99531000-99531800	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin02	Skin
31	chr10:99531000-99532000	Bivalent/Poised TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
32	chr10:99531000-99532000	Flanking Active TSS	Primary hematopoietic stem cells	blood
33	chr10:99531000-99532000	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells short term culture	blood
34	chr10:99531000-99532000	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin03	Skin
35	chr10:99531000-99532000	Bivalent Enhancer	Lung	lung
36	chr10:99531000-99532000	Bivalent Enhancer	Sigmoid Colon	Sigmoid Colon
37	chr10:99531000-99532000	Bivalent/Poised TSS	A549	lung
38	chr10:99531000-99532000	Bivalent/Poised TSS	HepG2	liver
39	chr10:99531000-99532200	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
40	chr10:99531200-99531600	Bivalent/Poised TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
41	chr10:99531200-99531600	Flanking Bivalent TSS/Enh	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
42	chr10:99531200-99531600	Bivalent/Poised TSS	Brain Germinal Matrix	brain
43	chr10:99531200-99531600	Flanking Bivalent TSS/Enh	HMEC	breast
44	chr10:99531200-99531800	Flanking Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
45	chr10:99531400-99531600	Bivalent/Poised TSS	IMR90 fetal lung fibroblasts Cell Line	lung
46	chr10:99531400-99531600	Bivalent/Poised TSS	Primary T regulatory cells fromperipheralblood	blood
47	chr10:99531400-99531600	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
48	chr10:99531400-99531600	Bivalent/Poised TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
49	chr10:99531400-99531600	Bivalent/Poised TSS	Foreskin Melanocyte Primary Cells skin01	Skin
50	chr10:99531400-99531600	Bivalent/Poised TSS	Brain Cingulate Gyrus	brain

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