The 2.0 version of rSNPBase

Variant report

Variant rs34207887
Chromosome Location chr11:45108536-45108537
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:45099800-45109000 Enhancers Primary Natural Killer cells fromperipheralblood blood
2 chr11:45100400-45113400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr11:45101600-45109600 Weak transcription Right Atrium heart
4 chr11:45102000-45109000 Weak transcription Fetal Brain Female brain
5 chr11:45102600-45109000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr11:45102600-45109200 Weak transcription NHEK skin
7 chr11:45102600-45109800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr11:45103600-45110400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
9 chr11:45105200-45108600 Weak transcription Stomach Mucosa stomach
10 chr11:45105200-45109200 Weak transcription Fetal Intestine Large intestine
11 chr11:45105200-45110600 Weak transcription Fetal Intestine Small intestine
12 chr11:45105400-45109000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr11:45105400-45109800 Weak transcription Lung lung
14 chr11:45105600-45112400 Weak transcription Primary hematopoietic stem cells blood
15 chr11:45105600-45113400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr11:45105600-45113400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr11:45106000-45113200 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr11:45106600-45110200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr11:45106600-45111600 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr11:45106800-45110400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr11:45107000-45108800 Enhancers H9 Cell Line embryonic stem cell
22 chr11:45107000-45109400 Enhancers iPS-15b Cell Line embryonic stem cell
23 chr11:45107000-45109400 Enhancers iPS-20b Cell Line embryonic stem cell
24 chr11:45107000-45109800 Enhancers HUES48 Cell Line embryonic stem cell
25 chr11:45107000-45109800 Enhancers Primary hematopoietic stem cells short term culture blood
26 chr11:45107000-45110000 Enhancers H1 Cell Line embryonic stem cell
27 chr11:45107000-45110200 Enhancers HUES6 Cell Line embryonic stem cell
28 chr11:45107000-45110200 Enhancers Brain Germinal Matrix brain
29 chr11:45107000-45116600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr11:45107200-45109800 Enhancers ES-I3 Cell Line embryonic stem cell
31 chr11:45107400-45108600 Bivalent Enhancer Fetal Muscle Trunk muscle
32 chr11:45107400-45109600 Enhancers Placenta Placenta
33 chr11:45107400-45110400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
34 chr11:45107400-45111400 Enhancers Fetal Stomach stomach
35 chr11:45107400-45111800 Enhancers Right Ventricle heart
36 chr11:45107400-45112400 Enhancers Fetal Muscle Leg muscle
37 chr11:45107400-45117400 Enhancers Breast Myoepithelial Primary Cells Breast
38 chr11:45107600-45108600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr11:45107600-45109200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr11:45107600-45109400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr11:45107600-45109600 Enhancers Primary B cells from peripheral blood blood
42 chr11:45107600-45111400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr11:45107600-45111800 Enhancers Esophagus oesophagus
44 chr11:45107600-45112800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
45 chr11:45107600-45115600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr11:45107600-45117200 Enhancers Spleen Spleen
47 chr11:45107800-45108600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
48 chr11:45107800-45108600 Enhancers Primary T cells fromperipheralblood blood
49 chr11:45107800-45109200 Weak transcription HMEC breast
50 chr11:45107800-45111400 Enhancers Brain Hippocampus Middle brain

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Last update: Aug 31, 2015