The 2.0 version of rSNPBase

Variant report

Variant rs34301355
Chromosome Location chr12:62699378-62699379
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:62684000-62716200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr12:62686200-62720200 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr12:62686400-62736400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr12:62686800-62704600 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr12:62687000-62699600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr12:62687000-62701400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr12:62687000-62702000 Weak transcription Gastric stomach
8 chr12:62687200-62718200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr12:62687400-62720600 Weak transcription Right Ventricle heart
10 chr12:62689400-62716000 Weak transcription Colonic Mucosa Colon
11 chr12:62689600-62717400 Weak transcription Brain Angular Gyrus brain
12 chr12:62690200-62702000 Weak transcription Left Ventricle heart
13 chr12:62691200-62699400 Weak transcription Pancreas Pancrea
14 chr12:62691200-62699600 Weak transcription Aorta Aorta
15 chr12:62691200-62716400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr12:62691200-62736400 Weak transcription Esophagus oesophagus
17 chr12:62691200-62736600 Weak transcription Lung lung
18 chr12:62691600-62699600 Weak transcription Spleen Spleen
19 chr12:62691800-62706000 Strong transcription Monocytes-CD14+_RO01746 blood
20 chr12:62692000-62699600 Weak transcription Brain Inferior Temporal Lobe brain
21 chr12:62692800-62699400 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr12:62693200-62699600 Weak transcription Fetal Stomach stomach
23 chr12:62693200-62711800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr12:62693400-62699400 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr12:62695200-62700800 ZNF genes & repeats GM12878-XiMat blood
26 chr12:62695600-62702600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
27 chr12:62695800-62701600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr12:62695800-62702200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
29 chr12:62696000-62702400 Strong transcription Primary T cells fromperipheralblood blood
30 chr12:62696200-62701600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr12:62696200-62703200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr12:62696200-62706400 Strong transcription Primary monocytes fromperipheralblood blood
33 chr12:62696400-62701600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr12:62696400-62702000 Strong transcription Placenta Placenta
35 chr12:62696400-62702200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr12:62696400-62702200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
37 chr12:62696400-62702400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr12:62696400-62702400 Strong transcription Liver Liver
39 chr12:62696400-62702400 Strong transcription Fetal Thymus thymus
40 chr12:62696600-62699800 Weak transcription Stomach Mucosa stomach
41 chr12:62696600-62700200 Strong transcription NH-A brain
42 chr12:62696600-62700200 Strong transcription Osteobl bone
43 chr12:62696600-62700600 Strong transcription HMEC breast
44 chr12:62696600-62701200 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr12:62696600-62702400 Strong transcription HSMM muscle
46 chr12:62696800-62699800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr12:62696800-62700000 Strong transcription HUVEC blood vessel
48 chr12:62696800-62701200 Strong transcription Primary T helper naive cells from peripheral blood blood
49 chr12:62696800-62701600 Strong transcription Fetal Brain Male brain
50 chr12:62696800-62702400 Strong transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015