Variant report

Variant rs34313764
Chromosome Location chr19:23947327-23947328
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23945200-23947400 Active TSS Colonic Mucosa Colon
2 chr19:23945200-23947400 Active TSS Rectal Smooth Muscle rectum
3 chr19:23945200-23947800 Active TSS Rectal Mucosa Donor 29 rectum
4 chr19:23945400-23947600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr19:23945400-23947600 Active TSS HUES48 Cell Line embryonic stem cell
6 chr19:23945400-23947800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr19:23945400-23947800 Active TSS K562 blood
8 chr19:23945400-23948000 Active TSS HUES64 Cell Line embryonic stem cell
9 chr19:23945400-23948200 Active TSS H9 Cell Line embryonic stem cell
10 chr19:23945400-23948400 Active TSS ES-I3 Cell Line embryonic stem cell
11 chr19:23945400-23949200 Active TSS HUES6 Cell Line embryonic stem cell
12 chr19:23945600-23947400 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
13 chr19:23945600-23947400 Active TSS Primary T regulatory cells fromperipheralblood blood
14 chr19:23945600-23947800 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr19:23945600-23947800 Active TSS ES-UCSF4 Cell Line embryonic stem cell
16 chr19:23945800-23948200 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr19:23946000-23947400 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
18 chr19:23946200-23949600 Weak transcription HSMMtube muscle
19 chr19:23946400-23947600 Active TSS H1 Cell Line embryonic stem cell
20 chr19:23946600-23951400 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr19:23946600-23956800 Weak transcription Gastric stomach
22 chr19:23946600-23960200 Weak transcription Spleen Spleen
23 chr19:23946600-23964600 Weak transcription Left Ventricle heart
24 chr19:23946600-23966000 Weak transcription Brain Cingulate Gyrus brain
25 chr19:23946800-23947400 Enhancers Primary T helper naive cells from peripheral blood blood
26 chr19:23946800-23947400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
27 chr19:23946800-23947400 Enhancers Primary T helper cells fromperipheralblood blood
28 chr19:23946800-23947400 Enhancers Primary T killer naive cells fromperipheralblood blood
29 chr19:23946800-23947600 Enhancers Primary T helper naive cells fromperipheralblood blood
30 chr19:23946800-23949600 Weak transcription Fetal Stomach stomach
31 chr19:23946800-23949600 Weak transcription Lung lung
32 chr19:23946800-23949800 Weak transcription Fetal Intestine Small intestine
33 chr19:23946800-23951600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr19:23946800-23952600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr19:23946800-23953400 Weak transcription Pancreas Pancrea
36 chr19:23946800-23953600 Weak transcription Placenta Placenta
37 chr19:23946800-23954200 Weak transcription Fetal Intestine Large intestine
38 chr19:23946800-23955000 Weak transcription NHEK skin
39 chr19:23946800-23956800 Weak transcription Fetal Muscle Leg muscle
40 chr19:23946800-23956800 Weak transcription Ovary ovary
41 chr19:23946800-23957000 Weak transcription Esophagus oesophagus
42 chr19:23946800-23957400 Weak transcription Adipose Nuclei Adipose
43 chr19:23946800-23959000 Weak transcription Fetal Muscle Trunk muscle
44 chr19:23946800-23959400 Weak transcription Brain Anterior Caudate brain
45 chr19:23946800-23962200 Weak transcription Placenta Amnion Placenta Amnion
46 chr19:23946800-23963800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
47 chr19:23946800-23964400 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr19:23946800-23966000 Weak transcription Primary T cells fromperipheralblood blood
49 chr19:23946800-23973000 Weak transcription Brain Hippocampus Middle brain
50 chr19:23947000-23947400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived

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