| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv949609 |
chr18:39126941-40070286 |
Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
11 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1059409 |
chr18:39711099-40139446 |
Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv909572 |
chr18:39938510-40064000 |
Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 4 |
nsv1055622 |
chr18:40040474-40057755 |
Enhancers Weak transcription
|
lncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 5 |
nsv1056192 |
chr18:40040474-40058395 |
Enhancers Weak transcription
|
lncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 6 |
nsv576736 |
chr18:40042007-40057525 |
Enhancers Weak transcription
|
lncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 7 |
nsv1059650 |
chr18:40044096-40057284 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 8 |
nsv1062292 |
chr18:40044096-40057755 |
Weak transcription Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 9 |
esv3447158 |
chr18:40045478-40320720 |
Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
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Last update: Aug 31, 2015