Variant report

Variant	rs34357239
Chromosome Location	chr4:106741238-106741239
allele	-/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879700	chr4:106643445-106745057	Strong transcription Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv3410206	chr4:106740919-106741435	Weak transcription Enhancers Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:106695200-106757000	Weak transcription	Primary B cells from cord blood	blood
2	chr4:106703200-106755600	Weak transcription	Primary hematopoietic stem cells	blood
3	chr4:106729200-106763400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr4:106730200-106764200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr4:106730400-106756400	Weak transcription	Fetal Stomach	stomach
6	chr4:106730400-106757600	Weak transcription	Psoas Muscle	Psoas
7	chr4:106730800-106761800	Weak transcription	HSMM	muscle
8	chr4:106732600-106755800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr4:106734400-106756400	Weak transcription	Fetal Thymus	thymus
10	chr4:106734800-106746600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr4:106735800-106747800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr4:106737000-106768600	Weak transcription	Duodenum Smooth Muscle	Duodenum
13	chr4:106737200-106754200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr4:106738800-106757200	Weak transcription	Sigmoid Colon	Sigmoid Colon
15	chr4:106740600-106741600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
16	chr4:106740800-106742200	Weak transcription	Skeletal Muscle Female	skeletal muscle
17	chr4:106741200-106741800	Active TSS	Stomach Smooth Muscle	stomach
18	chr4:106741200-106742000	Enhancers	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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