Variant report

Variant	rs34370433
Chromosome Location	chr8:59479790-59479791
allele	-/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:59477541..59481590-chr8:59482411..59486258,4	K562	blood:
2	chr8:59464567..59467546-chr8:59474944..59480287,7	MCF-7	breast:

Variant related genes	Relation type
ENSG00000137575	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv890938	chr8:59355053-59809785	Enhancers Strong transcription Flanking Active TSS Weak transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
2	nsv890939	chr8:59471187-59544413	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA target site	3 gene(s)	inside rSNPs	diseases
3	esv3385550	chr8:59479410-59479844	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59466800-59479800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr8:59467200-59486000	Weak transcription	Brain Angular Gyrus	brain
3	chr8:59467400-59559400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr8:59468000-59480000	Weak transcription	Brain Substantia Nigra	brain
5	chr8:59468200-59480000	Weak transcription	Fetal Kidney	kidney
6	chr8:59471600-59489200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr8:59472800-59515800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr8:59473000-59486000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr8:59473000-59489400	Weak transcription	H1 Cell Line	embryonic stem cell
10	chr8:59473000-59493200	Weak transcription	Fetal Heart	heart
11	chr8:59473000-59493400	Weak transcription	Esophagus	oesophagus
12	chr8:59473000-59497400	Weak transcription	Stomach Mucosa	stomach
13	chr8:59473000-59506400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
14	chr8:59473200-59480200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
15	chr8:59473200-59481000	Weak transcription	Colonic Mucosa	Colon
16	chr8:59473200-59481200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
17	chr8:59473200-59481400	Weak transcription	Fetal Intestine Small	intestine
18	chr8:59473200-59493400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr8:59473200-59508600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
20	chr8:59473400-59480200	Weak transcription	Fetal Stomach	stomach
21	chr8:59473400-59492200	Weak transcription	Aorta	Aorta
22	chr8:59473400-59495400	Weak transcription	H9 Cell Line	embryonic stem cell
23	chr8:59473600-59481200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
24	chr8:59473800-59480800	Weak transcription	Brain Germinal Matrix	brain
25	chr8:59474000-59497000	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
26	chr8:59474200-59480200	Weak transcription	GM12878-XiMat	blood
27	chr8:59475800-59480000	Genic enhancers	Primary T helper cells PMA-I stimulated	--
28	chr8:59476000-59480000	Weak transcription	Brain Cingulate Gyrus	brain
29	chr8:59476600-59480000	Weak transcription	Fetal Brain Male	brain
30	chr8:59476600-59481200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
31	chr8:59476600-59481400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
32	chr8:59476600-59505600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr8:59476800-59480000	Weak transcription	Right Ventricle	heart
34	chr8:59476800-59480000	Weak transcription	NHLF	lung
35	chr8:59476800-59480800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
36	chr8:59476800-59480800	Weak transcription	Gastric	stomach
37	chr8:59476800-59482800	Strong transcription	HSMM	muscle
38	chr8:59476800-59485600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
39	chr8:59476800-59489400	Weak transcription	Psoas Muscle	Psoas
40	chr8:59476800-59490800	Weak transcription	Brain Inferior Temporal Lobe	brain
41	chr8:59476800-59495400	Weak transcription	Pancreas	Pancrea
42	chr8:59476800-59500600	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
43	chr8:59477000-59508200	Strong transcription	HUES64 Cell Line	embryonic stem cell
44	chr8:59477200-59480400	Strong transcription	Primary B cells from cord blood	blood
45	chr8:59477200-59489800	Genic enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
46	chr8:59477200-59490600	Strong transcription	Primary monocytes fromperipheralblood	blood
47	chr8:59477200-59490600	Strong transcription	Monocytes-CD14+_RO01746	blood
48	chr8:59477200-59503000	Strong transcription	Primary neutrophils fromperipheralblood	blood
49	chr8:59477200-59503400	Strong transcription	NHDF-Ad	bronchial
50	chr8:59477200-59506200	Strong transcription	Primary hematopoietic stem cells short term culture	blood

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