The 2.0 version of rSNPBase

Variant report

Variant rs34372628
Chromosome Location chr1:10522276-10522277
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10499200-10531400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:10500800-10522800 Weak transcription Primary hematopoietic stem cells blood
3 chr1:10510600-10531600 Weak transcription Right Atrium heart
4 chr1:10511400-10522400 Weak transcription Fetal Kidney kidney
5 chr1:10511600-10531600 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr1:10512400-10531200 Weak transcription Fetal Brain Male brain
7 chr1:10515600-10522400 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr1:10516000-10530200 Strong transcription Primary hematopoietic stem cells short term culture blood
9 chr1:10516000-10530200 Strong transcription Fetal Stomach stomach
10 chr1:10516200-10526000 Strong transcription Fetal Brain Female brain
11 chr1:10516800-10528000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr1:10516800-10530200 Strong transcription Fetal Muscle Trunk muscle
13 chr1:10516800-10530400 Strong transcription HUES48 Cell Line embryonic stem cell
14 chr1:10517000-10529800 Strong transcription H1 Cell Line embryonic stem cell
15 chr1:10517200-10529400 Strong transcription Brain Germinal Matrix brain
16 chr1:10517400-10531600 Weak transcription Fetal Heart heart
17 chr1:10517600-10529600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr1:10517800-10527800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr1:10517800-10530400 Strong transcription HUES64 Cell Line embryonic stem cell
20 chr1:10518000-10522800 Weak transcription Small Intestine intestine
21 chr1:10518000-10529200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
22 chr1:10518000-10529600 Strong transcription H9 Cell Line embryonic stem cell
23 chr1:10518000-10529600 Strong transcription iPS-20b Cell Line embryonic stem cell
24 chr1:10518000-10530400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr1:10518200-10530200 Strong transcription Breast Myoepithelial Primary Cells Breast
26 chr1:10518400-10522600 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr1:10519000-10529200 Strong transcription Fetal Thymus thymus
28 chr1:10519000-10529400 Strong transcription Primary T helper cells fromperipheralblood blood
29 chr1:10519000-10529800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr1:10519200-10529600 Strong transcription Thymus Thymus
31 chr1:10519600-10522400 Weak transcription Brain Inferior Temporal Lobe brain
32 chr1:10519600-10522600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr1:10519600-10522600 Weak transcription HepG2 liver
34 chr1:10519600-10530600 Strong transcription HUES6 Cell Line embryonic stem cell
35 chr1:10519800-10522400 Weak transcription HSMM muscle
36 chr1:10519800-10522800 Weak transcription NHDF-Ad bronchial
37 chr1:10519800-10531400 Weak transcription Stomach Mucosa stomach
38 chr1:10520000-10522400 Weak transcription K562 blood
39 chr1:10520000-10522600 Weak transcription NH-A brain
40 chr1:10520000-10522600 Weak transcription NHEK skin
41 chr1:10520000-10531200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr1:10520000-10531400 Weak transcription Pancreatic Islets Pancreatic Islet
43 chr1:10520200-10531200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr1:10520400-10529600 Strong transcription Brain Hippocampus Middle brain
45 chr1:10520400-10530000 Strong transcription Fetal Adrenal Gland Adrenal Gland
46 chr1:10520600-10523000 Strong transcription Lung lung
47 chr1:10520600-10526800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr1:10520600-10529400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr1:10520600-10529600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr1:10520600-10530200 Strong transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015