| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1001552 |
chr2:51225970-52139741 |
Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv535708 |
chr2:51225970-52139741 |
Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1009513 |
chr2:51890060-52821980 |
ZNF genes & repeats Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
15 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv874079 |
chr2:51935797-52083566 |
Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv874080 |
chr2:51946163-52068507 |
Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv581914 |
chr2:51959258-52074452 |
Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv431047 |
chr2:51961737-52263543 |
Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv874081 |
chr2:51975932-52062108 |
Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv1013553 |
chr2:52010500-52471153 |
Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv535712 |
chr2:52010500-52471153 |
Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
nsv874083 |
chr2:52024350-52094039 |
Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 12 |
nsv874084 |
chr2:52025123-52062108 |
ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 13 |
nsv874085 |
chr2:52025123-52068507 |
Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 14 |
nsv874086 |
chr2:52025123-52094467 |
Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 15 |
nsv874087 |
chr2:52030983-52060125 |
Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 16 |
nsv581915 |
chr2:52030983-52066351 |
Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 17 |
nsv457751 |
chr2:52040842-52060125 |
Enhancers Weak transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 18 |
nsv581916 |
chr2:52040842-52060125 |
Enhancers Weak transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 19 |
nsv874088 |
chr2:52042513-52062108 |
Weak transcription Enhancers
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 20 |
nsv874089 |
chr2:52042513-52096257 |
Enhancers Weak transcription
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 21 |
nsv457762 |
chr2:52045220-52065417 |
Weak transcription Enhancers
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 22 |
nsv581917 |
chr2:52045220-52065417 |
Enhancers Weak transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 23 |
nsv457774 |
chr2:52048275-52065967 |
Weak transcription Enhancers
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 24 |
nsv581918 |
chr2:52048275-52065967 |
Enhancers Weak transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 25 |
nsv457785 |
chr2:52051069-52065162 |
Weak transcription Enhancers
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 26 |
nsv581919 |
chr2:52051069-52065162 |
Weak transcription Enhancers
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 27 |
nsv874090 |
chr2:52051069-52068507 |
Enhancers Weak transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:27 , 50 per page) page:
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