Variant report

Variant	rs34499046
Chromosome Location	chr4:91933043-91933044
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 69 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10015210	0.84[AFR][1000 genomes]
rs10440322	0.87[AFR][1000 genomes]
rs11097285	0.82[AFR][1000 genomes]
rs28751022	0.87[AFR][1000 genomes]
rs9992741	0.87[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:64 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879555	chr4:91743538-91967602	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv491945	chr4:91753638-92240582	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv10533	chr4:91842776-91935992	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	nsv879556	chr4:91889469-91941029	Enhancers ZNF genes & repeats Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv879557	chr4:91903868-91954105	ZNF genes & repeats Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv4423	chr4:91908999-91953040	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv879558	chr4:91911743-91948999	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv437404	chr4:91914415-91941029	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
9	nsv594836	chr4:91914972-91942194	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
10	nsv879559	chr4:91918870-92152678	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
11	nsv879560	chr4:91919028-91948999	ZNF genes & repeats Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
12	nsv436955	chr4:91926649-91941029	Enhancers ZNF genes & repeats Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
13	nsv436956	chr4:91926649-91941029	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
14	nsv436957	chr4:91926649-91941029	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
15	nsv594837	chr4:91927272-91935779	Weak transcription ZNF genes & repeats Enhancers	n/a	n/a	inside rSNPs	diseases
16	esv3467247	chr4:91930029-91937227	Weak transcription ZNF genes & repeats Enhancers	n/a	n/a	inside rSNPs	diseases
17	esv3464514	chr4:91930720-91933834	ZNF genes & repeats Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
18	esv3464515	chr4:91930720-91933834	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
19	esv3327247	chr4:91930879-91936852	ZNF genes & repeats Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
20	esv3464513	chr4:91930954-91934802	ZNF genes & repeats Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
21	esv3334299	chr4:91931148-91936041	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
22	esv3467249	chr4:91931421-91935943	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
23	esv3331735	chr4:91931455-91935919	Weak transcription ZNF genes & repeats Enhancers	n/a	n/a	inside rSNPs	diseases
24	esv3502243	chr4:91931455-91935946	Weak transcription ZNF genes & repeats Enhancers	n/a	n/a	inside rSNPs	diseases
25	esv3467250	chr4:91931477-91935909	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
26	esv3467248	chr4:91931478-91935904	Enhancers ZNF genes & repeats Weak transcription	n/a	n/a	inside rSNPs	diseases
27	esv3502244	chr4:91931498-91935886	ZNF genes & repeats Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
28	esv1835169	chr4:91931508-91935779	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
29	esv1837004	chr4:91931508-91935779	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
30	esv1841570	chr4:91931508-91935779	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
31	esv1845999	chr4:91931508-91935779	ZNF genes & repeats Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
32	esv1847802	chr4:91931508-91935779	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
33	esv1849831	chr4:91931508-91935779	Weak transcription ZNF genes & repeats Enhancers	n/a	n/a	inside rSNPs	diseases
34	esv1850543	chr4:91931508-91935779	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
35	esv3367182	chr4:91931518-91935856	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
36	esv3467251	chr4:91931542-91935842	ZNF genes & repeats Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
37	esv18910	chr4:91931552-91935848	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
38	nsv820701	chr4:91931552-91935848	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
39	nsv822643	chr4:91931552-91935848	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
40	esv3502245	chr4:91931553-91935840	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
41	nsv499054	chr4:91931556-91935838	ZNF genes & repeats Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
42	esv3467253	chr4:91931557-91935838	Enhancers ZNF genes & repeats Weak transcription	n/a	n/a	inside rSNPs	diseases
43	esv3502246	chr4:91931557-91935838	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
44	esv3464516	chr4:91932954-91936802	Weak transcription ZNF genes & repeats Enhancers	n/a	n/a	inside rSNPs	diseases
45	esv3464517	chr4:91932954-91936802	Weak transcription ZNF genes & repeats Enhancers	n/a	n/a	inside rSNPs	diseases
46	nsv594838	chr4:91933043-91934125	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
47	nsv594839	chr4:91933043-91935631	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
48	esv1835102	chr4:91933043-91935779	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
49	esv1837110	chr4:91933043-91935779	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
50	esv1838166	chr4:91933043-91935779	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:91924800-91933400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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