The 2.0 version of rSNPBase

Variant report

Variant rs34501687
Chromosome Location chr1:184384660-184384661
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:184359600-184391200 Weak transcription Duodenum Mucosa Duodenum
2 chr1:184360600-184386200 Weak transcription Primary hematopoietic stem cells short term culture blood
3 chr1:184362600-184386200 Weak transcription Lung lung
4 chr1:184377400-184387200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:184377800-184385800 Weak transcription Colon Smooth Muscle Colon
6 chr1:184377800-184387000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr1:184378000-184395600 Weak transcription Brain Germinal Matrix brain
8 chr1:184378200-184387000 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr1:184378200-184402400 Weak transcription Fetal Lung lung
10 chr1:184378400-184385800 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr1:184378400-184386200 Weak transcription Right Atrium heart
12 chr1:184378400-184388200 Weak transcription Fetal Muscle Leg muscle
13 chr1:184378400-184394200 Weak transcription Fetal Intestine Small intestine
14 chr1:184378400-184397400 Weak transcription Ovary ovary
15 chr1:184378600-184385600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr1:184378600-184385600 Weak transcription NHLF lung
17 chr1:184378600-184386200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr1:184378600-184388800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr1:184378800-184388200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr1:184378800-184388200 Weak transcription NHDF-Ad bronchial
21 chr1:184378800-184389000 Weak transcription Muscle Satellite Cultured Cells --
22 chr1:184379000-184384800 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr1:184379000-184385800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:184379000-184386200 Weak transcription Left Ventricle heart
25 chr1:184379000-184393000 Weak transcription Fetal Intestine Large intestine
26 chr1:184381400-184385600 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr1:184382800-184386000 Weak transcription Right Ventricle heart
28 chr1:184383400-184386400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr1:184383600-184394200 Weak transcription Spleen Spleen
30 chr1:184383800-184385600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr1:184383800-184387000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr1:184383800-184412400 Weak transcription Fetal Stomach stomach
33 chr1:184384000-184389600 Enhancers Breast Myoepithelial Primary Cells Breast
34 chr1:184384200-184385800 Enhancers NHEK skin
35 chr1:184384200-184386000 Enhancers HMEC breast
36 chr1:184384200-184386800 Enhancers HUES48 Cell Line embryonic stem cell
37 chr1:184384400-184385400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr1:184384400-184385800 Weak transcription Psoas Muscle Psoas
39 chr1:184384400-184387000 Enhancers iPS-15b Cell Line embryonic stem cell
40 chr1:184384400-184387000 Weak transcription Esophagus oesophagus
41 chr1:184384400-184392000 Enhancers Skeletal Muscle Male skeletal muscle
42 chr1:184384600-184385200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr1:184384600-184385800 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr1:184384600-184389800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015