Variant report

Variant	rs34549882
Chromosome Location	chr7:150589200-150589201
allele	-/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:150588951..150590460-chr7:150591915..150593623,2	K562	blood:
2	chr7:150588989..150591013-chr7:150594211..150596006,2	K562	blood:

Extended variants
information (count: 65 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:57)

rs_ID	r²[population]
rs10249447	0.83[ASN][1000 genomes]
rs10264535	0.91[ASN][1000 genomes]
rs10264668	0.80[ASN][1000 genomes]
rs10264799	0.91[ASN][1000 genomes]
rs10264902	0.91[ASN][1000 genomes]
rs10279036	0.91[ASN][1000 genomes]
rs10279051	0.91[ASN][1000 genomes]
rs10279186	0.91[ASN][1000 genomes]
rs11760854	0.85[ASN][1000 genomes]
rs11762854	0.95[ASN][1000 genomes]
rs11764238	0.91[ASN][1000 genomes]
rs11767097	0.95[ASN][1000 genomes]
rs11768123	0.83[ASN][1000 genomes]
rs11770409	0.95[ASN][1000 genomes]
rs11771771	0.85[ASN][1000 genomes]
rs11772624	0.91[ASN][1000 genomes]
rs11773715	0.95[ASN][1000 genomes]
rs12670489	0.95[ASN][1000 genomes]
rs12670945	0.95[ASN][1000 genomes]
rs12671154	0.95[ASN][1000 genomes]
rs17173650	0.91[ASN][1000 genomes]
rs17173651	0.91[ASN][1000 genomes]
rs17173652	0.86[ASN][1000 genomes]
rs17258890	0.95[ASN][1000 genomes]
rs2191754	0.95[ASN][1000 genomes]
rs2215562	0.95[ASN][1000 genomes]
rs2215563	0.85[ASN][1000 genomes]
rs2215564	0.85[ASN][1000 genomes]
rs2373877	0.86[ASN][1000 genomes]
rs28425705	0.91[ASN][1000 genomes]
rs28670237	0.91[ASN][1000 genomes]
rs28785222	0.91[ASN][1000 genomes]
rs28847671	0.91[ASN][1000 genomes]
rs2888686	0.91[ASN][1000 genomes]
rs2888687	0.91[ASN][1000 genomes]
rs2888688	0.91[ASN][1000 genomes]
rs28889269	0.91[ASN][1000 genomes]
rs4266560	0.85[ASN][1000 genomes]
rs4618613	0.91[ASN][1000 genomes]
rs62492377	0.95[ASN][1000 genomes]
rs62492378	0.95[ASN][1000 genomes]
rs62492379	0.95[ASN][1000 genomes]
rs62492382	0.95[ASN][1000 genomes]
rs66781963	0.86[ASN][1000 genomes]
rs67091546	0.85[ASN][1000 genomes]
rs73165560	0.85[ASN][1000 genomes]
rs73165563	0.95[ASN][1000 genomes]
rs73165568	0.95[ASN][1000 genomes]
rs73165572	0.95[ASN][1000 genomes]
rs73165573	0.95[ASN][1000 genomes]
rs73167603	0.95[ASN][1000 genomes]
rs732416	0.91[ASN][1000 genomes]
rs73468653	0.91[ASN][1000 genomes]
rs73468655	0.91[ASN][1000 genomes]
rs758892	0.91[ASN][1000 genomes]
rs758894	0.91[ASN][1000 genomes]
rs758895	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv608990	chr7:149961274-150707488	Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
2	nsv1017368	chr7:150016952-150655773	Bivalent Enhancer ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription Active TSS Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
3	nsv539195	chr7:150016952-150655773	Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
4	nsv1030109	chr7:150312916-150701010	Enhancers Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
5	nsv967475	chr7:150323577-150610034	Enhancers Bivalent Enhancer Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
6	esv2758140	chr7:150538821-150663697	Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
7	esv2759574	chr7:150538821-150663697	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
8	nsv967441	chr7:150566747-150612420	Active TSS Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:150587600-150589800	Enhancers	Primary B cells from peripheral blood	blood
2	chr7:150589200-150589400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin

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