Variant report

Variant rs34580316
Chromosome Location chr3:195266554-195266555
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195232000-195267400 Weak transcription Aorta Aorta
2 chr3:195236600-195268000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr3:195238400-195267800 Weak transcription NH-A brain
4 chr3:195238600-195266800 Weak transcription Brain Cingulate Gyrus brain
5 chr3:195240800-195267000 Weak transcription Ovary ovary
6 chr3:195244400-195267800 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr3:195244400-195268000 Weak transcription HUES48 Cell Line embryonic stem cell
8 chr3:195245800-195267800 Weak transcription Muscle Satellite Cultured Cells --
9 chr3:195246200-195267800 Weak transcription iPS-20b Cell Line embryonic stem cell
10 chr3:195246400-195267800 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr3:195247000-195267000 Weak transcription Gastric stomach
12 chr3:195248200-195267400 Weak transcription Colonic Mucosa Colon
13 chr3:195250200-195266800 Weak transcription NHEK skin
14 chr3:195250800-195267400 Weak transcription HSMM muscle
15 chr3:195251400-195267000 Weak transcription Brain Germinal Matrix brain
16 chr3:195251400-195267000 Weak transcription Brain Inferior Temporal Lobe brain
17 chr3:195251600-195267400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr3:195251800-195266800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr3:195251800-195267000 Weak transcription Fetal Muscle Leg muscle
20 chr3:195251800-195269200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr3:195252000-195267200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr3:195252000-195268400 Weak transcription Fetal Muscle Trunk muscle
23 chr3:195252400-195267400 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr3:195252600-195267800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr3:195254600-195267400 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr3:195255200-195267000 Weak transcription Liver Liver
27 chr3:195255200-195268200 Weak transcription Placenta Placenta
28 chr3:195256000-195267200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr3:195256600-195267000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr3:195256600-195267000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr3:195256600-195267800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr3:195256800-195267000 Weak transcription Fetal Lung lung
33 chr3:195257000-195267000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr3:195257000-195267000 Weak transcription Monocytes-CD14+_RO01746 blood
35 chr3:195260000-195266800 Weak transcription Fetal Heart heart
36 chr3:195260600-195267000 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr3:195261800-195267000 Weak transcription Primary hematopoietic stem cells blood
38 chr3:195261800-195267000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr3:195262200-195267200 Weak transcription Fetal Stomach stomach
40 chr3:195262200-195267400 Weak transcription Esophagus oesophagus
41 chr3:195262400-195267400 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr3:195262800-195267000 Weak transcription Brain Substantia Nigra brain
43 chr3:195263200-195266800 Weak transcription K562 blood
44 chr3:195263600-195267000 Weak transcription Pancreas Pancrea
45 chr3:195263800-195267800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr3:195264200-195266600 Enhancers Dnd41 blood
47 chr3:195264200-195266600 Flanking Active TSS GM12878-XiMat blood
48 chr3:195264400-195269000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
49 chr3:195264600-195266800 Flanking Active TSS Primary T cells from cord blood blood
50 chr3:195264600-195267600 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood

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