Variant report

Variant	rs34631193
Chromosome Location	chr10:117584703-117584704
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	SPI1	chr10:117584520-117584786	GM12891	blood:	n/a	n/a
2	SPI1	chr10:117584567-117584814	GM12878	blood:	n/a	n/a

Variant related genes	Relation type
ENSG00000270965	TF binding region

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs11197401	1.00[EUR][1000 genomes]
rs11197431	1.00[EUR][1000 genomes]
rs11813390	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11814381	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11814712	1.00[EUR][1000 genomes]
rs11816880	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11819655	1.00[EUR][1000 genomes]
rs12098691	1.00[EUR][1000 genomes]
rs17093583	1.00[EUR][1000 genomes]
rs17093626	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17093640	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17093691	1.00[EUR][1000 genomes]
rs2960691	1.00[EUR][1000 genomes]
rs60555064	1.00[EUR][1000 genomes]
rs61211775	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61413909	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6585368	1.00[EUR][1000 genomes]
rs6585369	1.00[EUR][1000 genomes]
rs6585370	1.00[EUR][1000 genomes]
rs73377539	1.00[EUR][1000 genomes]
rs73377574	1.00[EUR][1000 genomes]
rs73377579	1.00[EUR][1000 genomes]
rs73379707	1.00[EUR][1000 genomes]
rs73379745	1.00[EUR][1000 genomes]
rs73379766	1.00[EUR][1000 genomes]
rs73379771	1.00[EUR][1000 genomes]
rs73379774	1.00[EUR][1000 genomes]
rs73379788	1.00[EUR][1000 genomes]
rs73379792	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73381619	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73381628	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7905258	1.00[EUR][1000 genomes]
rs7914740	1.00[EUR][1000 genomes]
rs985951	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs985952	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117578400-117585000	Weak transcription	Colon Smooth Muscle	Colon
2	chr10:117583800-117586600	Weak transcription	Skeletal Muscle Male	skeletal muscle

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