Variant report

Variant	rs34733312
Chromosome Location	chr4:171616505-171616506
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10008486	0.84[EUR][1000 genomes]
rs10008580	0.80[EUR][1000 genomes]
rs10011002	0.80[EUR][1000 genomes]
rs10011982	0.90[ASN][1000 genomes]
rs13119766	0.81[ASN][1000 genomes]
rs17055995	0.81[ASN][1000 genomes]
rs17730489	0.81[AMR][1000 genomes]
rs28594344	0.81[ASN][1000 genomes]
rs34704211	0.81[ASN][1000 genomes]
rs34877800	0.83[EUR][1000 genomes]
rs34998985	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35270214	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35432171	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35735782	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35988152	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3927277	0.88[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs4123378	0.81[ASN][1000 genomes]
rs4591556	0.81[ASN][1000 genomes]
rs4607176	0.81[ASN][1000 genomes]
rs55654575	0.82[EUR][1000 genomes]
rs6828514	0.82[EUR][1000 genomes]
rs6828724	0.82[EUR][1000 genomes]
rs6851126	0.86[EUR][1000 genomes]
rs6852477	0.86[EUR][1000 genomes]
rs6853295	0.82[EUR][1000 genomes]
rs6855350	0.81[ASN][1000 genomes]
rs6855386	0.81[ASN][1000 genomes]
rs71607810	0.81[ASN][1000 genomes]
rs7667249	0.81[ASN][1000 genomes]
rs7667290	0.81[ASN][1000 genomes]
rs7672244	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9996819	0.80[EUR][1000 genomes]
rs9996914	0.84[EUR][1000 genomes]
rs9997039	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv596167	chr4:171576294-171672038	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:171612200-171616800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr4:171616200-171616600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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