Variant report

Variant	rs34735140
Chromosome Location	chr11:113345130-113345131
allele	-/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv556444	chr11:113234432-113383394	Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
2	nsv523683	chr11:113341391-113346955	Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
3	esv3404066	chr11:113344767-113347615	Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:52 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:113343200-113345200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
2	chr11:113344600-113345200	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
3	chr11:113344600-113345800	Flanking Bivalent TSS/Enh	Brain Germinal Matrix	brain
4	chr11:113344800-113345200	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr11:113344800-113345200	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
6	chr11:113344800-113345200	Bivalent Enhancer	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr11:113344800-113345200	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
8	chr11:113344800-113345200	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr11:113344800-113345200	Flanking Active TSS	Brain Anterior Caudate	brain
10	chr11:113344800-113345200	Flanking Bivalent TSS/Enh	Brain Inferior Temporal Lobe	brain
11	chr11:113344800-113345200	Flanking Bivalent TSS/Enh	Brain Substantia Nigra	brain
12	chr11:113344800-113345200	Bivalent Enhancer	Duodenum Mucosa	Duodenum
13	chr11:113344800-113345200	Bivalent Enhancer	Fetal Stomach	stomach
14	chr11:113344800-113345200	Bivalent Enhancer	NH-A	brain
15	chr11:113344800-113345400	Enhancers	Ovary	ovary
16	chr11:113344800-113345400	Bivalent Enhancer	Skeletal Muscle Male	skeletal muscle
17	chr11:113344800-113345800	Flanking Bivalent TSS/Enh	Brain Hippocampus Middle	brain
18	chr11:113344800-113345800	Flanking Active TSS	HMEC	breast
19	chr11:113344800-113346000	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr11:113344800-113346600	Bivalent Enhancer	Fetal Muscle Trunk	muscle
21	chr11:113344800-113346600	Enhancers	Pancreas	Pancrea
22	chr11:113344800-113346800	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
23	chr11:113344800-113346800	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
24	chr11:113345000-113345200	Flanking Bivalent TSS/Enh	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr11:113345000-113345200	Bivalent Enhancer	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
26	chr11:113345000-113345200	Flanking Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
27	chr11:113345000-113345200	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
28	chr11:113345000-113345200	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr11:113345000-113345200	Flanking Bivalent TSS/Enh	Brain Dorsolateral Prefrontal Cortex	brain
30	chr11:113345000-113345200	Flanking Bivalent TSS/Enh	Fetal Brain Female	brain
31	chr11:113345000-113345400	Bivalent Enhancer	ES-WA7 Cell Line	embryonic stem cell
32	chr11:113345000-113345400	Flanking Bivalent TSS/Enh	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
33	chr11:113345000-113345400	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
34	chr11:113345000-113345400	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland
35	chr11:113345000-113345400	Enhancers	Right Atrium	heart
36	chr11:113345000-113345400	Bivalent/Poised TSS	Stomach Smooth Muscle	stomach
37	chr11:113345000-113345600	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
38	chr11:113345000-113345600	Bivalent/Poised TSS	Brain Angular Gyrus	brain
39	chr11:113345000-113345600	Bivalent Enhancer	Fetal Brain Male	brain
40	chr11:113345000-113345600	Active TSS	HSMMtube	muscle
41	chr11:113345000-113345800	Flanking Bivalent TSS/Enh	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
42	chr11:113345000-113345800	Bivalent/Poised TSS	Brain Cingulate Gyrus	brain
43	chr11:113345000-113345800	Bivalent Enhancer	Fetal Intestine Large	intestine
44	chr11:113345000-113346000	Bivalent Enhancer	Adipose Nuclei	Adipose
45	chr11:113345000-113346000	Bivalent Enhancer	Lung	lung
46	chr11:113345000-113346200	Active TSS	Pancreatic Islets	Pancreatic Islet
47	chr11:113345000-113346400	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
48	chr11:113345000-113346400	Active TSS	iPS-15b Cell Line	embryonic stem cell
49	chr11:113345000-113346400	Enhancers	Gastric	stomach
50	chr11:113345000-113346600	Bivalent Enhancer	Placenta	Placenta

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