Variant report

Variant	rs34740996
Chromosome Location	chr14:65015722-65015723
allele	-/AT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:65005373..65008937-chr14:65014849..65020282,8	MCF-7	breast:
2	chr14:65006007..65010466-chr14:65011368..65016510,6	MCF-7	breast:
3	chr14:64971147..64972847-chr14:65015662..65018406,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000126803	Chromatin interaction
ENSG00000259116	Chromatin interaction
ENSG00000089775	Chromatin interaction
ENSG00000126804	Chromatin interaction

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv564907	chr14:65011509-65018663	Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
2	esv12236	chr14:65014784-65020415	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv442343	chr14:65015653-65019529	Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	nsv564908	chr14:65015655-65017474	Active TSS Bivalent Enhancer Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
5	nsv564909	chr14:65015655-65020267	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65008600-65016200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr14:65009000-65016200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr14:65009400-65016600	Weak transcription	Gastric	stomach
4	chr14:65009600-65016200	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr14:65010400-65015800	Weak transcription	Rectal Mucosa Donor 29	rectum
6	chr14:65010400-65015800	Weak transcription	Stomach Smooth Muscle	stomach
7	chr14:65010400-65016600	Weak transcription	Aorta	Aorta
8	chr14:65011200-65015800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr14:65011400-65015800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr14:65011400-65016000	Weak transcription	NHDF-Ad	bronchial
11	chr14:65011600-65016000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr14:65011600-65016000	Weak transcription	Colon Smooth Muscle	Colon
13	chr14:65011600-65016000	Weak transcription	Skeletal Muscle Male	skeletal muscle
14	chr14:65011600-65016000	Weak transcription	NHLF	lung
15	chr14:65011600-65016200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr14:65011800-65015800	Weak transcription	Brain Inferior Temporal Lobe	brain
17	chr14:65012000-65016000	Weak transcription	Brain Cingulate Gyrus	brain
18	chr14:65012000-65016200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
19	chr14:65012000-65016200	Weak transcription	Skeletal Muscle Female	skeletal muscle
20	chr14:65012000-65016600	Weak transcription	Brain Angular Gyrus	brain
21	chr14:65012200-65016000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr14:65013600-65016200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
23	chr14:65013800-65016600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
24	chr14:65015400-65016000	Enhancers	ES-I3 Cell Line	embryonic stem cell
25	chr14:65015400-65016200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
26	chr14:65015400-65016200	Enhancers	Brain Anterior Caudate	brain
27	chr14:65015400-65016200	Enhancers	Brain Substantia Nigra	brain
28	chr14:65015400-65016200	Enhancers	Hela-S3	cervix
29	chr14:65015400-65016200	Enhancers	NHEK	skin
30	chr14:65015600-65016000	Enhancers	Primary T helper cells PMA-I stimulated	--
31	chr14:65015600-65016200	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
32	chr14:65015600-65016200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
33	chr14:65015600-65016200	Enhancers	Primary T helper naive cells from peripheral blood	blood
34	chr14:65015600-65016400	Enhancers	Brain Hippocampus Middle	brain
35	chr14:65015600-65016400	Enhancers	Psoas Muscle	Psoas

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