Variant report

Variant	rs34774931
Chromosome Location	chr2:31112218-31112219
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs12988252	1.00[AFR][1000 genomes]
rs35056100	1.00[AFR][1000 genomes]
rs71444474	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833659	chr2:31020572-31171505	Weak transcription Enhancers Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:31109000-31123800	Weak transcription	Primary neutrophils fromperipheralblood	blood
2	chr2:31111600-31112400	Enhancers	HUES6 Cell Line	embryonic stem cell
3	chr2:31111600-31112600	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr2:31112200-31112400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr2:31112200-31112400	Enhancers	NHEK	skin
6	chr2:31112200-31114600	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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