Variant report

Variant rs34789323
Chromosome Location chr9:116917685-116917686
allele -/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:116916000-116917800 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
2 chr9:116916000-116917800 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
3 chr9:116916200-116917800 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
4 chr9:116916600-116917800 Bivalent Enhancer Primary T helper 17 cells PMA-I stimulated --
5 chr9:116916600-116917800 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
6 chr9:116916600-116917800 Flanking Active TSS Liver Liver
7 chr9:116916600-116918000 Bivalent/Poised TSS Fetal Thymus thymus
8 chr9:116916800-116917800 Bivalent Enhancer Primary hematopoietic stem cells short term culture blood
9 chr9:116916800-116918400 Enhancers Spleen Spleen
10 chr9:116917000-116917800 Bivalent/Poised TSS Brain Germinal Matrix brain
11 chr9:116917000-116917800 Bivalent Enhancer Placenta Placenta
12 chr9:116917200-116917800 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
13 chr9:116917200-116917800 Weak transcription Lung lung
14 chr9:116917200-116918200 Bivalent Enhancer Fetal Brain Male brain
15 chr9:116917200-116919000 Active TSS Right Atrium heart
16 chr9:116917200-116919200 Active TSS Pancreatic Islets Pancreatic Islet
17 chr9:116917200-116919400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
18 chr9:116917400-116917800 Enhancers Primary B cells from cord blood blood
19 chr9:116917400-116917800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
20 chr9:116917400-116917800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
21 chr9:116917400-116917800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr9:116917400-116917800 Enhancers Brain Substantia Nigra brain
23 chr9:116917400-116917800 Bivalent Enhancer Small Intestine intestine
24 chr9:116917400-116918000 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
25 chr9:116917400-116918000 Bivalent/Poised TSS Primary T cells effector/memory enriched fromperipheralblood blood
26 chr9:116917400-116918000 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr9:116917400-116918600 Active TSS Skeletal Muscle Female skeletal muscle
28 chr9:116917400-116918800 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
29 chr9:116917400-116918800 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
30 chr9:116917400-116918800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
31 chr9:116917400-116918800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
32 chr9:116917400-116918800 Active TSS Gastric stomach
33 chr9:116917400-116918800 Active TSS Pancreas Pancrea
34 chr9:116917400-116919000 Active TSS Duodenum Mucosa Duodenum
35 chr9:116917400-116919200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr9:116917400-116919200 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr9:116917400-116919200 Active TSS Rectal Smooth Muscle rectum
38 chr9:116917400-116919400 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
39 chr9:116917400-116919600 Active TSS Hela-S3 cervix
40 chr9:116917400-116919800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
41 chr9:116917600-116917800 Bivalent/Poised TSS Primary neutrophils fromperipheralblood blood
42 chr9:116917600-116917800 Active TSS Primary T helper memory cells from peripheral blood 2 blood
43 chr9:116917600-116917800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
44 chr9:116917600-116917800 Flanking Bivalent TSS/Enh Primary mononuclear cells fromperipheralblood Blood
45 chr9:116917600-116917800 Active TSS Adipose Nuclei Adipose
46 chr9:116917600-116917800 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
47 chr9:116917600-116917800 Weak transcription Left Ventricle heart
48 chr9:116917600-116917800 Active TSS Rectal Mucosa Donor 29 rectum
49 chr9:116917600-116917800 Enhancers Rectal Mucosa Donor 31 rectum
50 chr9:116917600-116917800 Flanking Active TSS Stomach Mucosa stomach

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