Variant report

Variant rs34797558
Chromosome Location chr18:9831675-9831676
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:9807800-9832000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr18:9812400-9834600 Weak transcription HUES6 Cell Line embryonic stem cell
3 chr18:9812400-9834800 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr18:9825400-9832200 Weak transcription Fetal Stomach stomach
5 chr18:9825400-9849800 Weak transcription Gastric stomach
6 chr18:9825800-9835400 Weak transcription Brain Angular Gyrus brain
7 chr18:9826000-9835200 Weak transcription Brain Anterior Caudate brain
8 chr18:9826200-9831800 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr18:9827800-9837800 Weak transcription Primary B cells from peripheral blood blood
10 chr18:9828200-9832200 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr18:9828400-9831800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr18:9828400-9832000 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr18:9828400-9835600 Weak transcription Fetal Heart heart
14 chr18:9828400-9838400 Weak transcription Primary hematopoietic stem cells blood
15 chr18:9828400-9846000 Weak transcription Pancreas Pancrea
16 chr18:9828600-9835000 Weak transcription Fetal Lung lung
17 chr18:9828600-9838000 Weak transcription HSMMtube muscle
18 chr18:9829000-9832000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr18:9829000-9833400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr18:9829000-9838000 Weak transcription HSMM muscle
21 chr18:9829000-9841600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr18:9829000-9845200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr18:9829000-9848200 Weak transcription Muscle Satellite Cultured Cells --
24 chr18:9829400-9832000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr18:9829400-9833800 Weak transcription NHLF lung
26 chr18:9829400-9838000 Weak transcription NH-A brain
27 chr18:9829600-9832200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr18:9829600-9835000 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr18:9829600-9838800 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr18:9829600-9846600 Weak transcription NHDF-Ad bronchial
31 chr18:9829800-9831800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr18:9829800-9832200 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr18:9829800-9834600 Weak transcription ES-WA7 Cell Line embryonic stem cell
34 chr18:9829800-9834800 Weak transcription NHEK skin
35 chr18:9829800-9835200 Weak transcription HMEC breast
36 chr18:9830200-9832000 Enhancers Fetal Intestine Large intestine
37 chr18:9830200-9832200 Enhancers Fetal Intestine Small intestine
38 chr18:9830400-9831800 Enhancers Duodenum Mucosa Duodenum
39 chr18:9830400-9839400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr18:9830800-9831800 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr18:9830800-9832200 Enhancers Brain Substantia Nigra brain
42 chr18:9830800-9832200 Enhancers Skeletal Muscle Female skeletal muscle
43 chr18:9831000-9831800 Enhancers Brain Hippocampus Middle brain
44 chr18:9831200-9831800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr18:9831200-9831800 Enhancers Adipose Nuclei Adipose
46 chr18:9831200-9831800 Weak transcription Aorta Aorta
47 chr18:9831200-9832000 Enhancers Right Ventricle heart
48 chr18:9831200-9832200 Enhancers Brain Inferior Temporal Lobe brain
49 chr18:9831200-9832200 Enhancers Stomach Smooth Muscle stomach
50 chr18:9831200-9832400 Enhancers Fetal Muscle Leg muscle

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