Variant report

Variant	rs34806740
Chromosome Location	chr2:190873911-190873912
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1036375	0.85[EUR][1000 genomes]
rs1036376	0.85[EUR][1000 genomes]
rs10931436	0.85[EUR][1000 genomes]
rs10931437	0.85[EUR][1000 genomes]
rs11694671	0.80[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs12465163	0.86[EUR][1000 genomes]
rs12693559	0.82[EUR][1000 genomes]
rs16832254	0.83[EUR][1000 genomes]
rs2164252	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2168058	0.89[EUR][1000 genomes]
rs6761221	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs7608094	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875618	chr2:190789387-190883360	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv3439094	chr2:190852495-190889473	ZNF genes & repeats Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs34806740	ORMDL1	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:190873800-190875000	Weak transcription	Muscle Satellite Cultured Cells	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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