Variant report

Variant	rs34819087
Chromosome Location	chr19:36901336-36901337
allele	-/AT/TG
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr19:36895506..36897062-chr19:36899280..36901611,2	K562	blood:

Variant related genes	Relation type
ENSG00000181007	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833816	chr19:36824257-37034287	ZNF genes & repeats Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
2	nsv1066026	chr19:36878441-36947928	ZNF genes & repeats Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
3	nsv1067101	chr19:36901010-36956251	ZNF genes & repeats Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:104 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:36880400-36904600	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr19:36882200-36908800	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr19:36882400-36907600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr19:36882600-36904200	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr19:36883000-36905200	ZNF genes & repeats	Primary T regulatory cells fromperipheralblood	blood
6	chr19:36885600-36908000	Weak transcription	K562	blood
7	chr19:36889800-36908200	Weak transcription	HepG2	liver
8	chr19:36890400-36901400	Strong transcription	HUES64 Cell Line	embryonic stem cell
9	chr19:36891000-36904800	Strong transcription	Dnd41	blood
10	chr19:36891200-36901400	ZNF genes & repeats	A549	lung
11	chr19:36891800-36908200	Weak transcription	Fetal Heart	heart
12	chr19:36891800-36908200	Weak transcription	Hela-S3	cervix
13	chr19:36892400-36901400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr19:36892400-36901600	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr19:36894400-36901400	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
16	chr19:36894400-36901600	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
17	chr19:36894400-36902600	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr19:36895000-36901400	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
19	chr19:36895000-36901400	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
20	chr19:36895000-36908200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
21	chr19:36895400-36901800	Strong transcription	Left Ventricle	heart
22	chr19:36895600-36901400	Strong transcription	iPS-20b Cell Line	embryonic stem cell
23	chr19:36895600-36901400	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
24	chr19:36896400-36901800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr19:36896600-36908200	Weak transcription	Right Ventricle	heart
26	chr19:36896600-36908400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
27	chr19:36897200-36908200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
28	chr19:36898200-36901400	Strong transcription	Placenta	Placenta
29	chr19:36898400-36901400	ZNF genes & repeats	Primary T helper naive cells fromperipheralblood	blood
30	chr19:36898400-36901400	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin01	Skin
31	chr19:36898400-36901400	Strong transcription	Brain Dorsolateral Prefrontal Cortex	brain
32	chr19:36898400-36901600	ZNF genes & repeats	Sigmoid Colon	Sigmoid Colon
33	chr19:36898400-36901800	ZNF genes & repeats	Primary T cells from cord blood	blood
34	chr19:36898400-36901800	ZNF genes & repeats	Fetal Brain Female	brain
35	chr19:36898400-36902400	ZNF genes & repeats	Ovary	ovary
36	chr19:36898400-36904400	ZNF genes & repeats	Primary T helper cells fromperipheralblood	blood
37	chr19:36898400-36904600	ZNF genes & repeats	Primary B cells from cord blood	blood
38	chr19:36898400-36904600	ZNF genes & repeats	Liver	Liver
39	chr19:36898400-36906800	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr19:36898400-36908600	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
41	chr19:36898800-36901400	ZNF genes & repeats	Fetal Lung	lung
42	chr19:36898800-36901800	ZNF genes & repeats	Primary T cells fromperipheralblood	blood
43	chr19:36898800-36902000	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
44	chr19:36898800-36902200	ZNF genes & repeats	IMR90 fetal lung fibroblasts Cell Line	lung
45	chr19:36899000-36902800	ZNF genes & repeats	Fetal Intestine Small	intestine
46	chr19:36899000-36904400	ZNF genes & repeats	Brain Germinal Matrix	brain
47	chr19:36899000-36908200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
48	chr19:36899200-36902000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
49	chr19:36899200-36903600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
50	chr19:36899200-36908400	Weak transcription	NH-A	brain

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