Variant report

Variant	rs34819986
Chromosome Location	chr10:27271790-27271791
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs12772934	0.81[AMR][1000 genomes]
rs12774853	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs34304798	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs35672619	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs71483826	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:27243000-27294800	Weak transcription	Liver	Liver
2	chr10:27244800-27271800	Weak transcription	Pancreas	Pancrea
3	chr10:27246600-27273000	Weak transcription	Fetal Stomach	stomach
4	chr10:27251600-27290000	Weak transcription	Fetal Intestine Large	intestine
5	chr10:27253400-27286400	Weak transcription	Primary hematopoietic stem cells	blood
6	chr10:27255400-27286800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr10:27255600-27282600	Weak transcription	Brain Anterior Caudate	brain
8	chr10:27257600-27319000	Weak transcription	Stomach Smooth Muscle	stomach
9	chr10:27258200-27291200	Weak transcription	Left Ventricle	heart
10	chr10:27258400-27290000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
11	chr10:27258600-27272800	Weak transcription	Skeletal Muscle Male	skeletal muscle
12	chr10:27269000-27273200	Strong transcription	Primary T cells from cord blood	blood
13	chr10:27269000-27293400	Weak transcription	Skeletal Muscle Female	skeletal muscle
14	chr10:27269600-27271800	Weak transcription	Lung	lung
15	chr10:27270200-27272800	Weak transcription	Duodenum Smooth Muscle	Duodenum
16	chr10:27270400-27291000	Weak transcription	Adipose Nuclei	Adipose
17	chr10:27270600-27273400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr10:27271600-27273200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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