Variant report

Variant	rs34844261
Chromosome Location	chr11:45630560-45630561
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs11822955	0.87[AFR][1000 genomes]
rs1348966	1.00[AMR][1000 genomes]
rs1992850	0.84[AFR][1000 genomes]
rs57339371	0.83[AFR][1000 genomes]
rs59774911	0.91[AFR][1000 genomes]
rs7482284	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7927000	0.86[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv897310	chr11:45487041-45631953	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:45628400-45639000	Weak transcription	Fetal Muscle Leg	muscle
2	chr11:45628600-45641600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr11:45629400-45631800	Enhancers	Primary neutrophils fromperipheralblood	blood
4	chr11:45630000-45638800	Weak transcription	Left Ventricle	heart
5	chr11:45630200-45631600	Weak transcription	Placenta	Placenta
6	chr11:45630400-45631600	Weak transcription	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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