Variant report

Variant	rs34844676
Chromosome Location	chr2:85953126-85953127
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:85937591..85939092-chr2:85951600..85953436,2	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs2164807	0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv874468	chr2:85926598-86001255	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv527770	chr2:85949396-85962551	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:85941200-85967400	Weak transcription	Esophagus	oesophagus
2	chr2:85947600-85956600	Weak transcription	Right Ventricle	heart
3	chr2:85947600-85957000	Weak transcription	Psoas Muscle	Psoas
4	chr2:85950400-85953600	Enhancers	Liver	Liver
5	chr2:85951000-85956400	Weak transcription	Colonic Mucosa	Colon
6	chr2:85951000-85959600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr2:85951200-85953400	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
8	chr2:85952000-85956000	Weak transcription	Osteobl	bone
9	chr2:85952200-85956000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr2:85952200-85956000	Weak transcription	Brain Anterior Caudate	brain
11	chr2:85952400-85954800	Weak transcription	Brain Hippocampus Middle	brain
12	chr2:85952400-85954800	Weak transcription	Left Ventricle	heart
13	chr2:85952400-85954800	Weak transcription	Lung	lung
14	chr2:85952400-85956000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
15	chr2:85952400-85960600	Weak transcription	Right Atrium	heart
16	chr2:85952600-85955200	Weak transcription	Skeletal Muscle Female	skeletal muscle
17	chr2:85952600-85956000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
18	chr2:85952600-85956000	Weak transcription	Ovary	ovary
19	chr2:85952600-85956400	Weak transcription	NHDF-Ad	bronchial
20	chr2:85952600-85962400	Weak transcription	Fetal Kidney	kidney
21	chr2:85952800-85954400	Weak transcription	Adipose Nuclei	Adipose
22	chr2:85953000-85955000	Weak transcription	Primary monocytes fromperipheralblood	blood
23	chr2:85953000-85955000	Weak transcription	Skeletal Muscle Male	skeletal muscle
24	chr2:85953000-85955000	Weak transcription	Monocytes-CD14+_RO01746	blood
25	chr2:85953000-85955200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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