Variant report

Variant	rs34856011
Chromosome Location	chr2:114765905-114765906
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs13013451	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13016677	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2292521	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs3982225	0.85[AMR][1000 genomes]
rs62171660	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs72837220	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7561433	0.92[AMR][1000 genomes];0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv874904	chr2:114751691-115605062	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:114755600-114768000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr2:114762200-114768000	Enhancers	HepG2	liver
3	chr2:114764800-114778200	Weak transcription	Pancreas	Pancrea
4	chr2:114765800-114766600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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