Variant report

Variant rs34859621
Chromosome Location chr6:53601052-53601053
allele -/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:53596000-53601600 Weak transcription HUES48 Cell Line embryonic stem cell
2 chr6:53596000-53605600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr6:53597200-53604000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr6:53598400-53601200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr6:53598400-53601400 Enhancers Fetal Intestine Small intestine
6 chr6:53598400-53603000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr6:53598600-53601400 Enhancers Fetal Intestine Large intestine
8 chr6:53599200-53601200 Enhancers Duodenum Mucosa Duodenum
9 chr6:53599200-53603000 Enhancers Fetal Heart heart
10 chr6:53599400-53601200 Enhancers Primary T helper 17 cells PMA-I stimulated --
11 chr6:53599400-53601200 Enhancers Fetal Thymus thymus
12 chr6:53599400-53601200 Enhancers Thymus Thymus
13 chr6:53599400-53602200 Enhancers Primary hematopoietic stem cells short term culture blood
14 chr6:53599400-53602600 Enhancers HSMMtube muscle
15 chr6:53599600-53601200 Enhancers Primary T helper naive cells from peripheral blood blood
16 chr6:53599600-53601200 Enhancers Primary T helper cells PMA-I stimulated --
17 chr6:53599600-53601200 Enhancers Primary T killer naive cells fromperipheralblood blood
18 chr6:53599800-53601200 Enhancers Primary T cells from cord blood blood
19 chr6:53599800-53601200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
20 chr6:53599800-53601200 Enhancers Primary T helper cells fromperipheralblood blood
21 chr6:53599800-53601400 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr6:53599800-53601600 Enhancers Primary hematopoietic stem cells blood
23 chr6:53599800-53602800 Enhancers Brain Germinal Matrix brain
24 chr6:53599800-53603000 Enhancers HUVEC blood vessel
25 chr6:53599800-53603200 Enhancers NHEK skin
26 chr6:53599800-53606200 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr6:53600000-53601200 Enhancers Primary neutrophils fromperipheralblood blood
28 chr6:53600000-53601200 Enhancers Primary T killer memory cells from peripheral blood blood
29 chr6:53600000-53601400 Enhancers Hela-S3 cervix
30 chr6:53600000-53605800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr6:53600400-53601400 Weak transcription NH-A brain
32 chr6:53600400-53601800 Weak transcription Muscle Satellite Cultured Cells --
33 chr6:53600800-53602000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr6:53600800-53602000 Weak transcription Placenta Amnion Placenta Amnion
35 chr6:53600800-53602000 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr6:53600800-53603600 Enhancers Dnd41 blood
37 chr6:53600800-53606200 Weak transcription Primary T cells fromperipheralblood blood
38 chr6:53601000-53601800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr6:53601000-53602000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr6:53601000-53602200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr6:53601000-53602200 Weak transcription HMEC breast
42 chr6:53601000-53602600 Weak transcription Placenta Placenta
43 chr6:53601000-53606000 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr6:53601000-53606200 Weak transcription Primary T helper naive cells fromperipheralblood blood

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