Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:119615775..119617389-chr12:119662533..119665044,2	MCF-7	breast:
2	chr12:119662826..119664972-chr12:119720982..119723971,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000152137	Chromatin interaction

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1047036	chr12:119477583-119992640	Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
2	nsv832528	chr12:119638211-119793401	Weak transcription Bivalent Enhancer Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	esv275239	chr12:119662785-119666740	Weak transcription Enhancers Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:119658400-119663200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr12:119662000-119663200	Weak transcription	Fetal Heart	heart
3	chr12:119662400-119663400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr12:119662400-119663600	Enhancers	H1 Cell Line	embryonic stem cell
5	chr12:119662400-119663600	Enhancers	H9 Cell Line	embryonic stem cell
6	chr12:119662400-119663800	Enhancers	Left Ventricle	heart
7	chr12:119662600-119663400	Weak transcription	Lung	lung
8	chr12:119662600-119663400	Weak transcription	Psoas Muscle	Psoas
9	chr12:119662600-119663600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
10	chr12:119662600-119663800	Enhancers	Fetal Muscle Leg	muscle
11	chr12:119662800-119663800	Enhancers	Skeletal Muscle Female	skeletal muscle
12	chr12:119663000-119663800	Enhancers	iPS-18 Cell Line	embryonic stem cell
13	chr12:119663200-119663600	Enhancers	HUES48 Cell Line	embryonic stem cell
14	chr12:119663200-119663600	Enhancers	HUES6 Cell Line	embryonic stem cell
15	chr12:119663200-119663600	Enhancers	HUES64 Cell Line	embryonic stem cell
16	chr12:119663200-119663600	Enhancers	iPS-15b Cell Line	embryonic stem cell
17	chr12:119663200-119663600	Active TSS	Skeletal Muscle Male	skeletal muscle
18	chr12:119663200-119663800	Enhancers	iPS-20b Cell Line	embryonic stem cell
19	chr12:119663200-119663800	Enhancers	Pancreas	Pancrea
20	chr12:119663200-119664400	Enhancers	Fetal Heart	heart

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