Variant report

Variant	rs34890043
Chromosome Location	chr8:124851007-124851008
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs16898956	0.83[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831451	chr8:124710946-124885148	Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:124849400-124853400	Enhancers	Hela-S3	cervix
2	chr8:124849600-124852000	Enhancers	NH-A	brain
3	chr8:124850000-124853400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr8:124850200-124852200	Weak transcription	HUVEC	blood vessel
5	chr8:124850600-124851400	Enhancers	NHEK	skin
6	chr8:124850800-124851200	Enhancers	Duodenum Mucosa	Duodenum
7	chr8:124850800-124851400	Weak transcription	Primary monocytes fromperipheralblood	blood
8	chr8:124850800-124851600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr8:124850800-124851600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr8:124850800-124851600	Weak transcription	Small Intestine	intestine
11	chr8:124850800-124852800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr8:124850800-124852800	Enhancers	HSMMtube	muscle
13	chr8:124850800-124853000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr8:124850800-124853000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr8:124850800-124853400	Enhancers	Osteobl	bone
16	chr8:124850800-124853600	Enhancers	HMEC	breast
17	chr8:124850800-124853600	Enhancers	HSMM	muscle
18	chr8:124850800-124855200	Weak transcription	Aorta	Aorta
19	chr8:124851000-124851200	Enhancers	Monocytes-CD14+_RO01746	blood
20	chr8:124851000-124851200	Weak transcription	NHLF	lung
21	chr8:124851000-124851400	Weak transcription	Primary T helper cells fromperipheralblood	blood
22	chr8:124851000-124851400	Weak transcription	Stomach Mucosa	stomach
23	chr8:124851000-124852000	Enhancers	NHDF-Ad	bronchial
24	chr8:124851000-124852600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr8:124851000-124853000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr8:124851000-124853200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
27	chr8:124851000-124853200	Enhancers	Muscle Satellite Cultured Cells	--
28	chr8:124851000-124853400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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