The 2.0 version of rSNPBase

Variant report

Variant rs34957911
Chromosome Location chr11:6581658-6581659
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:6545000-6589600 Weak transcription Osteobl bone
2 chr11:6550400-6589600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr11:6554600-6601400 Weak transcription Primary B cells from cord blood blood
4 chr11:6554800-6589600 Weak transcription Colon Smooth Muscle Colon
5 chr11:6555200-6589600 Weak transcription NHLF lung
6 chr11:6555600-6584800 Weak transcription Primary T helper cells PMA-I stimulated --
7 chr11:6556000-6589800 Weak transcription A549 lung
8 chr11:6556000-6591600 Weak transcription Fetal Thymus thymus
9 chr11:6562800-6613400 Weak transcription GM12878-XiMat blood
10 chr11:6563200-6589800 Weak transcription Brain Germinal Matrix brain
11 chr11:6564800-6603600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr11:6566200-6588200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr11:6566400-6585600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr11:6566600-6589600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr11:6566800-6589600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr11:6566800-6605400 Weak transcription Primary hematopoietic stem cells blood
17 chr11:6567000-6584600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr11:6567000-6596400 Weak transcription Rectal Smooth Muscle rectum
19 chr11:6567200-6589600 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr11:6567400-6589600 Weak transcription Ovary ovary
21 chr11:6568000-6603800 Weak transcription Primary T cells fromperipheralblood blood
22 chr11:6568200-6588000 Weak transcription Brain Inferior Temporal Lobe brain
23 chr11:6568400-6584200 Weak transcription Brain Substantia Nigra brain
24 chr11:6568400-6588400 Weak transcription Brain Cingulate Gyrus brain
25 chr11:6568600-6585000 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr11:6568600-6603600 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr11:6568800-6586600 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr11:6568800-6587400 Weak transcription Gastric stomach
29 chr11:6569000-6584200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr11:6569000-6584600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr11:6569000-6587600 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr11:6569000-6588600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr11:6569000-6589400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr11:6569000-6604600 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr11:6569200-6587800 Weak transcription Thymus Thymus
36 chr11:6569600-6589400 Weak transcription Fetal Brain Female brain
37 chr11:6570200-6582200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr11:6570200-6612600 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr11:6578200-6585400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr11:6578200-6589600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr11:6578200-6601400 Weak transcription Duodenum Mucosa Duodenum
42 chr11:6578400-6583000 Weak transcription K562 blood
43 chr11:6578800-6589800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr11:6579000-6587400 Weak transcription Liver Liver
45 chr11:6579000-6589200 Weak transcription Brain Angular Gyrus brain
46 chr11:6579000-6591800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr11:6579200-6581800 Enhancers Skeletal Muscle Female skeletal muscle
48 chr11:6579200-6584200 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr11:6579200-6585000 Weak transcription Brain Anterior Caudate brain
50 chr11:6579400-6582200 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015