Variant report

Variant rs34974859
Chromosome Location chr1:78048920-78048921
allele -/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:78006200-78064400 Weak transcription Stomach Mucosa stomach
2 chr1:78023200-78050200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr1:78024800-78071000 Weak transcription Gastric stomach
4 chr1:78025400-78050600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
5 chr1:78026000-78049400 Strong transcription Primary T cells fromperipheralblood blood
6 chr1:78026800-78049200 Weak transcription Colonic Mucosa Colon
7 chr1:78027200-78049800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr1:78028600-78054600 Weak transcription Esophagus oesophagus
9 chr1:78029800-78050600 Strong transcription Primary T helper cells fromperipheralblood blood
10 chr1:78030200-78049400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr1:78030400-78050400 Strong transcription Breast Myoepithelial Primary Cells Breast
12 chr1:78032000-78049000 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr1:78032000-78062800 Weak transcription Fetal Heart heart
14 chr1:78032600-78070800 Weak transcription Aorta Aorta
15 chr1:78032800-78070600 Weak transcription Small Intestine intestine
16 chr1:78033000-78057000 Weak transcription Spleen Spleen
17 chr1:78033000-78057200 Weak transcription Psoas Muscle Psoas
18 chr1:78033200-78072600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr1:78033400-78057600 Weak transcription Right Ventricle heart
20 chr1:78033400-78069600 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr1:78033600-78051400 Weak transcription Brain Cingulate Gyrus brain
22 chr1:78033600-78070800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr1:78034000-78056200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr1:78034400-78049400 Weak transcription ES-WA7 Cell Line embryonic stem cell
25 chr1:78036400-78052800 Strong transcription Monocytes-CD14+_RO01746 blood
26 chr1:78036600-78050200 Strong transcription NHDF-Ad bronchial
27 chr1:78036800-78049600 Strong transcription Dnd41 blood
28 chr1:78037000-78050600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr1:78037200-78049000 Strong transcription Duodenum Smooth Muscle Duodenum
30 chr1:78037800-78055400 Weak transcription Brain Inferior Temporal Lobe brain
31 chr1:78038400-78050200 Strong transcription Osteobl bone
32 chr1:78038600-78053000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr1:78038600-78071000 Weak transcription Pancreas Pancrea
34 chr1:78039000-78070800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr1:78039800-78049000 Strong transcription Rectal Mucosa Donor 29 rectum
36 chr1:78039800-78049600 Strong transcription Primary monocytes fromperipheralblood blood
37 chr1:78040200-78049600 Strong transcription Fetal Lung lung
38 chr1:78041800-78050800 Weak transcription Brain Angular Gyrus brain
39 chr1:78042000-78070800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr1:78042000-78074600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
41 chr1:78042200-78073800 Weak transcription Fetal Brain Female brain
42 chr1:78042800-78051800 Weak transcription Brain Germinal Matrix brain
43 chr1:78043000-78070200 Weak transcription Brain Substantia Nigra brain
44 chr1:78044200-78054600 Weak transcription Fetal Intestine Small intestine
45 chr1:78044200-78055200 Weak transcription Ovary ovary
46 chr1:78044200-78069000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr1:78044400-78063000 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr1:78046000-78049600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr1:78046400-78056000 Weak transcription Rectal Smooth Muscle rectum
50 chr1:78046800-78054600 Weak transcription H9 Cell Line embryonic stem cell

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