Variant report

Variant	rs34976331
Chromosome Location	chr4:121575571-121575572
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:121575389..121577725-chr4:121580963..121583228,2	K562	blood:
2	chr4:121574015..121575886-chr4:121579540..121581895,2	MCF-7	breast:

Extended variants
information (count: 134 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:131)

rs_ID	r²[population]
rs10518370	0.85[AMR][1000 genomes]
rs10518371	0.85[AMR][1000 genomes]
rs10518372	0.85[AMR][1000 genomes]
rs10518374	0.85[AMR][1000 genomes]
rs11723367	0.83[AMR][1000 genomes]
rs11724927	0.85[AMR][1000 genomes]
rs11724930	0.85[AMR][1000 genomes]
rs11728109	0.85[AMR][1000 genomes]
rs11729628	0.91[AMR][1000 genomes]
rs11731617	0.80[AMR][1000 genomes]
rs11732446	0.85[AMR][1000 genomes]
rs11732848	0.85[AMR][1000 genomes]
rs11733879	0.85[AMR][1000 genomes]
rs11733936	0.85[AMR][1000 genomes]
rs11734300	0.85[AMR][1000 genomes]
rs11735265	0.85[AMR][1000 genomes]
rs11737109	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11737151	0.85[AMR][1000 genomes]
rs11737569	0.91[AMR][1000 genomes]
rs13106533	0.85[AMR][1000 genomes]
rs13108960	0.85[AMR][1000 genomes]
rs13109673	0.85[AMR][1000 genomes]
rs13111403	0.85[AMR][1000 genomes]
rs13113003	0.85[AMR][1000 genomes]
rs13114914	0.85[AMR][1000 genomes]
rs13114990	0.85[AMR][1000 genomes]
rs13115111	0.85[AMR][1000 genomes]
rs13117731	0.85[AMR][1000 genomes]
rs13118612	0.95[AMR][1000 genomes]
rs13119260	0.80[AMR][1000 genomes]
rs13121457	0.80[AMR][1000 genomes]
rs13122891	0.85[AMR][1000 genomes]
rs13134136	0.83[AMR][1000 genomes]
rs13135003	0.83[AMR][1000 genomes]
rs13137585	0.85[AMR][1000 genomes]
rs13137989	0.83[AMR][1000 genomes]
rs13138000	0.85[AMR][1000 genomes]
rs13139281	0.87[AMR][1000 genomes]
rs13139630	0.85[AMR][1000 genomes]
rs13143036	0.80[AMR][1000 genomes]
rs13146556	0.83[AMR][1000 genomes]
rs13147093	0.83[AMR][1000 genomes]
rs13148917	0.85[AMR][1000 genomes]
rs13149281	0.85[AMR][1000 genomes]
rs13149724	0.80[AMR][1000 genomes]
rs13152087	0.83[AMR][1000 genomes]
rs1390555	0.85[AMR][1000 genomes]
rs1496261	0.85[AMR][1000 genomes]
rs17051175	0.85[AMR][1000 genomes]
rs17051185	0.85[AMR][1000 genomes]
rs17343622	0.85[AMR][1000 genomes]
rs17344584	0.85[AMR][1000 genomes]
rs17345304	0.85[AMR][1000 genomes]
rs17345577	0.85[AMR][1000 genomes]
rs17345605	0.85[AMR][1000 genomes]
rs17402740	0.85[AMR][1000 genomes]
rs17403545	0.85[AMR][1000 genomes]
rs17403789	0.85[AMR][1000 genomes]
rs17403845	0.85[AMR][1000 genomes]
rs17403950	0.85[AMR][1000 genomes]
rs17403971	0.85[AMR][1000 genomes]
rs1908696	0.85[AMR][1000 genomes]
rs1908697	0.85[AMR][1000 genomes]
rs1908698	0.85[AMR][1000 genomes]
rs1948542	0.80[AMR][1000 genomes]
rs2047298	0.80[AMR][1000 genomes]
rs2101890	0.83[AMR][1000 genomes]
rs34019707	0.85[AMR][1000 genomes]
rs34026717	0.85[AMR][1000 genomes]
rs34107387	0.85[AMR][1000 genomes]
rs34348079	0.83[AMR][1000 genomes]
rs34354392	0.85[AMR][1000 genomes]
rs34441682	0.85[AMR][1000 genomes]
rs34441970	0.85[AMR][1000 genomes]
rs34537067	0.85[AMR][1000 genomes]
rs34537501	0.83[AMR][1000 genomes]
rs34592685	0.82[AMR][1000 genomes]
rs34648640	0.85[AMR][1000 genomes]
rs34660823	0.85[AMR][1000 genomes]
rs34769920	0.85[AMR][1000 genomes]
rs34776884	0.85[AMR][1000 genomes]
rs34827843	0.85[AMR][1000 genomes]
rs34883201	0.85[AMR][1000 genomes]
rs34885860	0.85[AMR][1000 genomes]
rs34954787	0.85[AMR][1000 genomes]
rs34980755	0.85[AMR][1000 genomes]
rs34981703	0.85[AMR][1000 genomes]
rs35013646	0.85[AMR][1000 genomes]
rs35045796	0.85[AMR][1000 genomes]
rs35130646	0.85[AMR][1000 genomes]
rs35142371	0.85[AMR][1000 genomes]
rs35233728	0.85[AMR][1000 genomes]
rs35247805	0.85[AMR][1000 genomes]
rs35251153	0.83[AMR][1000 genomes]
rs35431307	0.85[AMR][1000 genomes]
rs35449481	0.85[AMR][1000 genomes]
rs35513623	0.85[AMR][1000 genomes]
rs35514445	0.85[AMR][1000 genomes]
rs35541048	0.85[AMR][1000 genomes]
rs35579125	0.85[AMR][1000 genomes]
rs35626362	0.85[AMR][1000 genomes]
rs35683155	0.85[AMR][1000 genomes]
rs35691521	0.85[AMR][1000 genomes]
rs35771660	0.82[AMR][1000 genomes]
rs35821073	0.83[AMR][1000 genomes]
rs35833719	0.83[AMR][1000 genomes]
rs35883135	0.85[AMR][1000 genomes]
rs35894759	0.85[AMR][1000 genomes]
rs36007284	0.82[AMR][1000 genomes]
rs36052384	0.83[AMR][1000 genomes]
rs36132252	0.85[AMR][1000 genomes]
rs36148945	0.85[AMR][1000 genomes]
rs4473670	0.85[AMR][1000 genomes]
rs4555666	0.85[AMR][1000 genomes]
rs56118203	0.83[AMR][1000 genomes]
rs66538908	0.83[AMR][1000 genomes]
rs67061841	0.85[AMR][1000 genomes]
rs67177335	0.85[AMR][1000 genomes]
rs67379024	0.85[AMR][1000 genomes]
rs67410634	0.85[AMR][1000 genomes]
rs67464100	0.85[AMR][1000 genomes]
rs67521998	0.85[AMR][1000 genomes]
rs67588490	0.85[AMR][1000 genomes]
rs67781895	0.85[AMR][1000 genomes]
rs67799603	0.85[AMR][1000 genomes]
rs67814940	0.85[AMR][1000 genomes]
rs67844626	0.85[AMR][1000 genomes]
rs67870439	0.85[AMR][1000 genomes]
rs72676317	0.85[AMR][1000 genomes]
rs72676335	0.91[AMR][1000 genomes]
rs766623	0.85[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879852	chr4:121108734-121768496	Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv998094	chr4:121504565-122374203	Weak transcription Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
3	nsv1004485	chr4:121542992-121716769	Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:121570000-121577400	Weak transcription	Aorta	Aorta

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