Variant report

Variant rs35006
Chromosome Location chr5:53442725-53442726
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:53409200-53448000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr5:53409200-53465600 Weak transcription Fetal Intestine Large intestine
3 chr5:53425400-53467200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr5:53428000-53471600 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr5:53429400-53455800 Weak transcription Fetal Intestine Small intestine
6 chr5:53430000-53446600 Weak transcription Monocytes-CD14+_RO01746 blood
7 chr5:53430200-53445400 Weak transcription K562 blood
8 chr5:53431800-53474000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr5:53432000-53462400 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr5:53432200-53467600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr5:53432600-53462000 Weak transcription Primary T cells fromperipheralblood blood
12 chr5:53433000-53480800 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr5:53433200-53443400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr5:53433200-53444400 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr5:53435000-53462000 Weak transcription Primary T helper cells fromperipheralblood blood
16 chr5:53437400-53444000 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr5:53440400-53448600 Enhancers Fetal Heart heart
18 chr5:53440600-53443000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr5:53440800-53443800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr5:53441800-53443800 Enhancers Adipose Nuclei Adipose
21 chr5:53441800-53444200 Enhancers Colon Smooth Muscle Colon
22 chr5:53441800-53461600 Weak transcription Primary B cells from cord blood blood
23 chr5:53441800-53461800 Weak transcription Primary T cells from cord blood blood
24 chr5:53442000-53449400 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr5:53442200-53443000 Enhancers Right Ventricle heart
26 chr5:53442400-53443000 Enhancers Cortex derived primary cultured neurospheres brain
27 chr5:53442400-53443000 Enhancers Fetal Muscle Leg muscle
28 chr5:53442400-53443200 Enhancers Stomach Smooth Muscle stomach
29 chr5:53442400-53443600 Enhancers Left Ventricle heart
30 chr5:53442400-53443600 Enhancers Ovary ovary
31 chr5:53442400-53443600 Enhancers Right Atrium heart
32 chr5:53442400-53444200 Enhancers Fetal Lung lung
33 chr5:53442400-53464200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
34 chr5:53442600-53443200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr5:53442600-53443600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr5:53442600-53444000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
37 chr5:53442600-53444600 Enhancers Fetal Stomach stomach

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