The 2.0 version of rSNPBase

Variant report

Variant rs35006813
Chromosome Location chr3:48969199-48969200
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:48957400-49003800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr3:48957600-48974400 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr3:48959000-48971600 Strong transcription Cortex derived primary cultured neurospheres brain
4 chr3:48959000-48974000 Strong transcription iPS-20b Cell Line embryonic stem cell
5 chr3:48959000-48976000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr3:48959000-48976200 Strong transcription HUES64 Cell Line embryonic stem cell
7 chr3:48959200-48971000 Strong transcription Fetal Muscle Leg muscle
8 chr3:48959200-48973600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr3:48959400-48976200 Strong transcription Fetal Thymus thymus
10 chr3:48959600-48975800 Strong transcription HUES6 Cell Line embryonic stem cell
11 chr3:48960000-48970000 Weak transcription Pancreas Pancrea
12 chr3:48962000-48970000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr3:48962000-49000400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr3:48963400-48970400 Genic enhancers Primary T helper cells fromperipheralblood blood
15 chr3:48964200-48970000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr3:48964200-48970400 Genic enhancers Primary T helper cells PMA-I stimulated --
17 chr3:48965200-48970000 Weak transcription Lung lung
18 chr3:48965200-49004200 Weak transcription Colonic Mucosa Colon
19 chr3:48965400-48970000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr3:48965400-48970000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr3:48965400-48970800 Weak transcription Brain Germinal Matrix brain
22 chr3:48965400-48981200 Weak transcription Right Ventricle heart
23 chr3:48965400-49000000 Weak transcription Esophagus oesophagus
24 chr3:48965600-48973800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr3:48965800-48969800 Weak transcription Stomach Smooth Muscle stomach
26 chr3:48965800-48970000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr3:48965800-48995400 Weak transcription H9 Cell Line embryonic stem cell
28 chr3:48965800-49000000 Weak transcription Placenta Amnion Placenta Amnion
29 chr3:48965800-49004000 Weak transcription Fetal Brain Male brain
30 chr3:48966000-48973600 Strong transcription Dnd41 blood
31 chr3:48966000-48986000 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr3:48966000-49008000 Weak transcription Fetal Kidney kidney
33 chr3:48966200-48969400 Weak transcription A549 lung
34 chr3:48966200-48970800 Genic enhancers Primary T cells fromperipheralblood blood
35 chr3:48966200-48971400 Strong transcription Fetal Intestine Small intestine
36 chr3:48966400-48975800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr3:48966600-48972600 Strong transcription Monocytes-CD14+_RO01746 blood
38 chr3:48966600-48986200 Weak transcription NHLF lung
39 chr3:48966800-48970000 Enhancers Primary T killer naive cells fromperipheralblood blood
40 chr3:48966800-48970200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr3:48966800-48986200 Weak transcription HMEC breast
42 chr3:48967000-48970000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr3:48967200-48970000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr3:48967200-48970400 Weak transcription Primary B cells from cord blood blood
45 chr3:48967200-48972800 Strong transcription Primary monocytes fromperipheralblood blood
46 chr3:48967200-48977200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr3:48967200-48980800 Weak transcription Aorta Aorta
48 chr3:48967400-48969400 Weak transcription Primary T helper naive cells from peripheral blood blood
49 chr3:48967400-48969400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr3:48967400-48969400 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015