Variant report

Variant	rs35065188
Chromosome Location	chr8:1972606-1972607
allele	A/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs28561745	0.87[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889712	chr8:1591412-2337777	Weak transcription Active TSS Strong transcription Enhancers ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:1969800-1974200	Weak transcription	Fetal Kidney	kidney
2	chr8:1972000-1976400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr8:1972200-1973200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr8:1972200-1977400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr8:1972200-1981600	Weak transcription	Spleen	Spleen
6	chr8:1972400-1973200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr8:1972400-1973400	Weak transcription	Primary hematopoietic stem cells	blood
8	chr8:1972400-1973400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
9	chr8:1972400-1973400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr8:1972400-1973400	Weak transcription	Right Atrium	heart
11	chr8:1972400-1974600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr8:1972400-1974800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr8:1972400-1975200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr8:1972400-1977400	Weak transcription	Fetal Brain Male	brain
15	chr8:1972400-1977600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr8:1972400-1978600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
17	chr8:1972600-1973800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr8:1972600-1974200	Weak transcription	Brain Anterior Caudate	brain
19	chr8:1972600-1977400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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