The 2.0 version of rSNPBase

Variant report

Variant rs35073987
Chromosome Location chr2:173335230-173335231
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:173321400-173356000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:173326400-173340400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr2:173327200-173353200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr2:173327400-173338600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr2:173327400-173345000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr2:173327800-173370800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr2:173328000-173335800 Weak transcription H9 Cell Line embryonic stem cell
8 chr2:173328800-173339000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr2:173328800-173353400 Weak transcription Right Ventricle heart
10 chr2:173329000-173335800 Weak transcription Gastric stomach
11 chr2:173329000-173335800 Weak transcription Lung lung
12 chr2:173329400-173335800 Weak transcription Left Ventricle heart
13 chr2:173329400-173344400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr2:173329800-173371200 Weak transcription Hela-S3 cervix
15 chr2:173330200-173335800 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr2:173330200-173342200 Weak transcription Brain Substantia Nigra brain
17 chr2:173330200-173345600 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr2:173330200-173350400 Weak transcription Primary B cells from cord blood blood
19 chr2:173330400-173335800 Weak transcription Primary hematopoietic stem cells blood
20 chr2:173330400-173339400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr2:173330400-173360400 Weak transcription Small Intestine intestine
22 chr2:173330600-173335800 Weak transcription K562 blood
23 chr2:173330600-173336000 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr2:173330600-173337400 Weak transcription Liver Liver
25 chr2:173330600-173339000 Weak transcription Fetal Muscle Trunk muscle
26 chr2:173330600-173339400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr2:173330600-173339600 Weak transcription Brain Inferior Temporal Lobe brain
28 chr2:173330600-173344600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr2:173330600-173344800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr2:173330600-173344800 Weak transcription Adipose Nuclei Adipose
31 chr2:173330600-173345000 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr2:173330600-173345000 Weak transcription NH-A brain
33 chr2:173330600-173345200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr2:173330600-173345600 Weak transcription Brain Hippocampus Middle brain
35 chr2:173330600-173346400 Strong transcription H1 Cell Line embryonic stem cell
36 chr2:173330600-173351400 Weak transcription Psoas Muscle Psoas
37 chr2:173330600-173351400 Weak transcription Rectal Smooth Muscle rectum
38 chr2:173330600-173351600 Weak transcription Brain Anterior Caudate brain
39 chr2:173330600-173352400 Weak transcription Placenta Amnion Placenta Amnion
40 chr2:173330600-173352600 Weak transcription ES-WA7 Cell Line embryonic stem cell
41 chr2:173330600-173352600 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr2:173330600-173353200 Weak transcription iPS-15b Cell Line embryonic stem cell
43 chr2:173330600-173353200 Weak transcription Aorta Aorta
44 chr2:173330600-173353400 Weak transcription Fetal Stomach stomach
45 chr2:173330600-173371400 Strong transcription HUES64 Cell Line embryonic stem cell
46 chr2:173330600-173372200 Strong transcription iPS-20b Cell Line embryonic stem cell
47 chr2:173330600-173373200 Strong transcription NHEK skin
48 chr2:173330600-173373400 Strong transcription HUES48 Cell Line embryonic stem cell
49 chr2:173330600-173373400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr2:173330600-173373600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015