The 2.0 version of rSNPBase

Variant report

Variant rs35083921
Chromosome Location chr1:61796460-61796461
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:61744600-61798600 Weak transcription Fetal Muscle Trunk muscle
2 chr1:61784800-61799400 Weak transcription Left Ventricle heart
3 chr1:61784800-61800400 Weak transcription Ovary ovary
4 chr1:61784800-61802800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr1:61784800-61803200 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr1:61784800-61803600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:61785000-61797200 Weak transcription HUVEC blood vessel
8 chr1:61785000-61802400 Weak transcription Primary hematopoietic stem cells blood
9 chr1:61785000-61802400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr1:61786000-61813600 Weak transcription Duodenum Mucosa Duodenum
11 chr1:61786200-61799000 Weak transcription Fetal Intestine Large intestine
12 chr1:61786400-61798600 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr1:61786600-61799800 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr1:61786600-61800400 Weak transcription Brain Anterior Caudate brain
15 chr1:61786600-61800400 Weak transcription Colon Smooth Muscle Colon
16 chr1:61786600-61800400 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr1:61788400-61800600 Weak transcription Gastric stomach
18 chr1:61788400-61802800 Weak transcription Placenta Placenta
19 chr1:61790000-61799000 Weak transcription Liver Liver
20 chr1:61790000-61799000 Weak transcription K562 blood
21 chr1:61790000-61799800 Weak transcription Right Ventricle heart
22 chr1:61790000-61803600 Weak transcription Hela-S3 cervix
23 chr1:61790000-61805400 Weak transcription Lung lung
24 chr1:61790200-61800600 Weak transcription Pancreas Pancrea
25 chr1:61790400-61798000 Weak transcription Fetal Muscle Leg muscle
26 chr1:61790400-61798200 Weak transcription Aorta Aorta
27 chr1:61791200-61799000 Weak transcription Fetal Stomach stomach
28 chr1:61791200-61800200 Weak transcription Fetal Intestine Small intestine
29 chr1:61791200-61800400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr1:61791400-61799000 Weak transcription Fetal Lung lung
31 chr1:61792600-61798000 Weak transcription HepG2 liver
32 chr1:61792600-61799600 Weak transcription Psoas Muscle Psoas
33 chr1:61792800-61800400 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr1:61793000-61800400 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr1:61793200-61799200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr1:61795600-61800200 Weak transcription Brain Hippocampus Middle brain
37 chr1:61795600-61800400 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr1:61796000-61803600 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr1:61796200-61796600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr1:61796200-61802400 Weak transcription A549 lung
41 chr1:61796200-61805400 Weak transcription Esophagus oesophagus
42 chr1:61796400-61796800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr1:61796400-61797200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr1:61796400-61798400 Enhancers NHEK skin

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Last update: Aug 31, 2015