Variant report

Variant	rs35116734
Chromosome Location	chr13:97995386-97995387
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr13:97992068..97993792-chr13:97995269..97997609,2	K562	blood:
2	chr13:97876461..97879359-chr13:97993954..97996741,2	K562	blood:
3	chr13:97990074..97993792-chr13:97995202..97997609,3	K562	blood:
4	chr13:97992598..97996850-chr13:97999522..98001186,3	K562	blood:
5	chr13:97766467..97768967-chr13:97995152..97997045,2	MCF-7	breast:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs16954031	0.86[ASN][1000 genomes]
rs74106934	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832694	chr13:97930561-98137882	ZNF genes & repeats Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:109 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:97981000-97998800	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr13:97982000-98002200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr13:97982000-98009000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr13:97982600-98020800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
5	chr13:97984000-98000800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
6	chr13:97986200-98003200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
7	chr13:97986600-97998400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
8	chr13:97989200-97999000	Weak transcription	Colonic Mucosa	Colon
9	chr13:97989400-97996600	Weak transcription	Fetal Thymus	thymus
10	chr13:97989400-97999200	Weak transcription	NH-A	brain
11	chr13:97989600-97998600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
12	chr13:97989600-97999400	Weak transcription	Primary T helper cells PMA-I stimulated	--
13	chr13:97990000-97995600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr13:97990000-97998600	Weak transcription	Primary T helper cells fromperipheralblood	blood
15	chr13:97991200-97998800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr13:97991400-97995400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr13:97991400-97996800	Weak transcription	Cortex derived primary cultured neurospheres	brain
18	chr13:97991400-98002600	Weak transcription	Fetal Brain Female	brain
19	chr13:97991600-97996600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr13:97991600-97998800	Weak transcription	Rectal Mucosa Donor 29	rectum
21	chr13:97991600-97999000	Weak transcription	Spleen	Spleen
22	chr13:97991600-97999600	Weak transcription	Primary hematopoietic stem cells	blood
23	chr13:97991600-98020800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
24	chr13:97991800-97996600	Weak transcription	Fetal Heart	heart
25	chr13:97991800-97997000	Weak transcription	HMEC	breast
26	chr13:97991800-97998600	Weak transcription	Rectal Mucosa Donor 31	rectum
27	chr13:97991800-97999000	Weak transcription	Esophagus	oesophagus
28	chr13:97991800-98001000	Weak transcription	Fetal Brain Male	brain
29	chr13:97992000-97995400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
30	chr13:97992000-97996400	Weak transcription	Primary B cells from cord blood	blood
31	chr13:97992000-97998400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
32	chr13:97992000-97998800	Weak transcription	Gastric	stomach
33	chr13:97992000-98006200	Weak transcription	Psoas Muscle	Psoas
34	chr13:97992200-97999200	Weak transcription	Aorta	Aorta
35	chr13:97992400-97995400	Weak transcription	Primary T cells fromperipheralblood	blood
36	chr13:97992400-97996600	Weak transcription	Muscle Satellite Cultured Cells	--
37	chr13:97992400-97996600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
38	chr13:97992400-97998800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
39	chr13:97992400-97998800	Weak transcription	Pancreas	Pancrea
40	chr13:97992400-97999000	Weak transcription	Right Ventricle	heart
41	chr13:97992400-97999400	Weak transcription	HSMMtube	muscle
42	chr13:97992600-97995400	Weak transcription	Brain Inferior Temporal Lobe	brain
43	chr13:97992600-97997000	Weak transcription	Brain Angular Gyrus	brain
44	chr13:97992600-97997000	Weak transcription	Right Atrium	heart
45	chr13:97992600-97999000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
46	chr13:97992800-97995400	Weak transcription	Adipose Nuclei	Adipose
47	chr13:97992800-97995600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
48	chr13:97992800-98001000	Weak transcription	HSMM	muscle
49	chr13:97992800-98020800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
50	chr13:97993000-97995400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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