Variant report

Variant	rs35136581
Chromosome Location	chrX:83720171-83720172
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs37686	0.86[EUR][1000 genomes]
rs37689	0.86[EUR][1000 genomes]
rs37692	0.86[EUR][1000 genomes]
rs37706	0.86[EUR][1000 genomes]
rs37709	0.86[EUR][1000 genomes]
rs40218	0.82[EUR][1000 genomes]
rs40361	0.86[EUR][1000 genomes]
rs42222	0.86[EUR][1000 genomes]
rs441391	0.83[EUR][1000 genomes]
rs450407	0.89[EUR][1000 genomes]
rs615429	0.89[EUR][1000 genomes]
rs702552	0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv519860	chrX:83514450-83920663	Active TSS Bivalent/Poised TSS Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv3451709	chrX:83547608-83804807	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:83695000-83723400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chrX:83714000-83724200	Weak transcription	HUVEC	blood vessel
3	chrX:83717200-83737800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chrX:83717600-83721000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chrX:83719200-83738000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chrX:83719600-83725400	Weak transcription	Cortex derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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