Variant report

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs12189359	0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs12189375	0.83[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs13170786	0.88[EUR][1000 genomes]
rs13174706	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13183703	0.81[EUR][1000 genomes]
rs13189719	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1505036	0.97[EUR][1000 genomes]
rs17523716	0.96[ASN][1000 genomes]
rs17523908	0.96[ASN][1000 genomes]
rs17523929	0.96[ASN][1000 genomes]
rs17524082	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs17602097	0.96[ASN][1000 genomes]
rs17602477	0.96[ASN][1000 genomes]
rs17602533	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17602672	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1909723	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1973477	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2055624	0.85[EUR][1000 genomes]
rs2173691	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2402182	0.97[EUR][1000 genomes]
rs34970512	0.88[EUR][1000 genomes]
rs35010130	0.85[EUR][1000 genomes]
rs36056396	0.97[EUR][1000 genomes]
rs36139170	0.97[EUR][1000 genomes]
rs4379195	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4509020	0.92[ASN][1000 genomes]
rs61026653	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6870946	0.97[EUR][1000 genomes]
rs6870947	0.97[EUR][1000 genomes]
rs6877517	0.83[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs73752492	0.96[ASN][1000 genomes]
rs7733676	0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3439178	chr2:190877215-191124499	Enhancers Weak transcription ZNF genes & repeats Active TSS Strong transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:190996600-191008200	Weak transcription	Aorta	Aorta
2	chr2:190997000-191006200	Weak transcription	Psoas Muscle	Psoas
3	chr2:191004800-191006800	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast

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