Variant report

Variant	rs35242389
Chromosome Location	chr4:20338563-20338564
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs56008233	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv593792	chr4:20275477-20362716	Enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:20326000-20338800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr4:20329000-20350200	Weak transcription	Colon Smooth Muscle	Colon
3	chr4:20329200-20348800	Weak transcription	NHDF-Ad	bronchial
4	chr4:20335400-20342600	Weak transcription	Brain Anterior Caudate	brain
5	chr4:20335400-20342600	Weak transcription	Fetal Kidney	kidney
6	chr4:20336000-20342800	Weak transcription	Fetal Lung	lung
7	chr4:20336400-20340800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr4:20336600-20342800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr4:20337200-20338800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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