Variant report

Variant	rs35248934
Chromosome Location	chr8:20984233-20984234
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:20983096..20985679-chr8:20989458..20991827,2	K562	blood:

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs12543521	1.00[ASN][1000 genomes]
rs13252980	1.00[ASN][1000 genomes]
rs13274991	1.00[ASN][1000 genomes]
rs13276572	1.00[ASN][1000 genomes]
rs17093549	1.00[ASN][1000 genomes]
rs17093555	1.00[ASN][1000 genomes]
rs17093564	1.00[ASN][1000 genomes]
rs17093578	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17423926	1.00[ASN][1000 genomes]
rs17495702	1.00[ASN][1000 genomes]
rs17495757	1.00[ASN][1000 genomes]
rs17495792	1.00[ASN][1000 genomes]
rs17495841	1.00[ASN][1000 genomes]
rs1841509	1.00[ASN][1000 genomes]
rs34224528	1.00[ASN][1000 genomes]
rs34757817	1.00[ASN][1000 genomes]
rs35057973	1.00[ASN][1000 genomes]
rs35325460	1.00[ASN][1000 genomes]
rs35549782	1.00[ASN][1000 genomes]
rs35627243	1.00[ASN][1000 genomes]
rs35698958	1.00[ASN][1000 genomes]
rs35816769	1.00[ASN][1000 genomes]
rs35888205	1.00[ASN][1000 genomes]
rs36082431	1.00[ASN][1000 genomes]
rs36096496	1.00[ASN][1000 genomes]
rs4582551	1.00[ASN][1000 genomes]
rs66823428	1.00[ASN][1000 genomes]
rs67413955	1.00[ASN][1000 genomes]
rs67922235	1.00[ASN][1000 genomes]
rs71513804	1.00[ASN][1000 genomes]
rs71513806	1.00[ASN][1000 genomes]
rs71513807	1.00[ASN][1000 genomes]
rs71513808	1.00[ASN][1000 genomes]
rs73623456	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1032450	chr8:20514995-21033577	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	nsv539524	chr8:20514995-21033577	Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
3	nsv1034265	chr8:20742935-21152545	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
4	nsv539528	chr8:20742935-21152545	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
5	nsv831260	chr8:20907266-21097125	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
6	nsv469878	chr8:20955260-21128307	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
7	nsv482339	chr8:20955260-21128307	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:20981800-20984400	Enhancers	Left Ventricle	heart
2	chr8:20982000-20989600	Enhancers	Fetal Heart	heart
3	chr8:20982200-20985600	Enhancers	Pancreas	Pancrea
4	chr8:20982400-20984600	Enhancers	Gastric	stomach
5	chr8:20982400-20984600	Enhancers	Right Ventricle	heart
6	chr8:20982400-20984800	Enhancers	Skeletal Muscle Male	skeletal muscle
7	chr8:20982800-20986400	Weak transcription	Fetal Thymus	thymus
8	chr8:20983000-20984600	Enhancers	Fetal Muscle Leg	muscle
9	chr8:20983400-20986400	Weak transcription	Primary hematopoietic stem cells	blood
10	chr8:20983400-20986400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
11	chr8:20983400-20986800	Weak transcription	Primary T cells from cord blood	blood
12	chr8:20983400-20987000	Weak transcription	Lung	lung
13	chr8:20983400-20987200	Weak transcription	Right Atrium	heart
14	chr8:20983600-20984400	Enhancers	Brain Germinal Matrix	brain
15	chr8:20983600-20986200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr8:20983800-20984800	Enhancers	Breast Myoepithelial Primary Cells	Breast
17	chr8:20984000-20984800	Enhancers	Skeletal Muscle Female	skeletal muscle
18	chr8:20984000-20986400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr8:20984200-20984800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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